Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 GLYATL1P2-202ENST00000588046 902 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AL138895.2-201ENST00000603019 178 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AL137246.2-201ENST00000613439 662 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AF117829.2-201ENST00000619538 361 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 MT-RNR2-201ENST00000387347 1559 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 MRRFP1-201ENST00000435941 1675 ntBASIC7.83□□□□□ -1.16
CHMP4AQ9BY43 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 RNU6-670P-201ENST00000364312 104 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 RN7SKP166-201ENST00000410812 305 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC007562.1-201ENST00000421819 517 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 NPM1P26-201ENST00000426339 738 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC002069.1-201ENST00000429649 1159 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 RPS10P18-201ENST00000442662 495 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC023274.2-201ENST00000445264 521 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC016027.4-201ENST00000450866 277 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC104629.2-201ENST00000468627 598 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AP002373.2-201ENST00000541631 1060 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 SULT1C2P2-201ENST00000562517 294 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC119403.2-201ENST00000590960 598 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC073333.2-201ENST00000603589 769 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 RN7SL261P-201ENST00000613441 282 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC022400.9-201ENST00000623633 273 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 DNM1P47-203ENST00000571780 12667 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC018717.1-201ENST00000457712 1505 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AL354854.1-201ENST00000455940 1363 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AL137141.1-201ENST00000624622 4836 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 AC006511.3-201ENST00000624929 1783 ntBASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4AQ9BY43 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 SNORA70H-201ENST00000383910 135 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 SNORA70J-201ENST00000384182 135 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 RPS17P17-201ENST00000419392 409 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 UBE2V2P3-201ENST00000433562 437 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC025458.1-201ENST00000506046 166 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC093815.1-201ENST00000508637 280 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC027369.2-201ENST00000528030 440 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC020916.2-201ENST00000591242 360 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 SNX6P1-201ENST00000601728 1224 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 AC108865.2-201ENST00000606881 432 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4AQ9BY43 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms