Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSX3Q99909 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 ADAM24P-201ENST00000398655 2101 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 SNORD16-201ENST00000362803 99 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 SNORA5.1-201ENST00000384275 131 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSX3Q99909 RBBP4P5-201ENST00000398583 1266 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 MTND2P12-201ENST00000417560 1252 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 RPL21P50-201ENST00000417698 477 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AC002127.1-201ENST00000421305 225 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AL157884.1-201ENST00000424561 454 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX3Q99909 RPSAP65-201ENST00000429660 595 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC009237.1-201ENST00000442127 744 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 POU5F1P5-201ENST00000445059 658 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX3Q99909 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 AC011853.1-201ENST00000518911 454 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC078878.1-201ENST00000539832 958 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX3Q99909 TPRX1P1-201ENST00000557620 319 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC005632.2-201ENST00000564271 828 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC020915.5-201ENST00000596836 964 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AL590410.1-201ENST00000617925 333 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AF117829.2-201ENST00000619538 361 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 AC105105.5-201ENST00000622635 1294 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.17□□□□□ -1.58
SSX3Q99909 AC073593.1-201ENST00000624500 411 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AL132640.3-201ENST00000630473 177 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 AC111152.1-202ENST00000635848 339 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX3Q99909 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 AC083899.1-201ENST00000454465 3819 ntBASIC5.17□□□□□ -1.58
SSX3Q99909 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX3Q99909 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 CASC19-248ENST00000641674 1356 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SSX3Q99909 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SSX3Q99909 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SSX3Q99909 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 NXF4-202ENST00000416098 1465 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.16□□□□□ -1.58
SSX3Q99909 AC010132.2-201ENST00000295493 1043 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX3Q99909 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SSX3Q99909 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.16□□□□□ -1.58
SSX3Q99909 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SSX3Q99909 RNA5SP187-201ENST00000384400 119 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 MIR188-201ENST00000385034 86 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.16□□□□□ -1.58
SSX3Q99909 DSTNP5-201ENST00000427921 523 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 AC108479.1-201ENST00000431142 427 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 GAPDHP34-201ENST00000432112 823 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 AL392003.1-201ENST00000434394 243 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.16□□□□□ -1.58
SSX3Q99909 CXCR2P1-202ENST00000443392 1074 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 OR13K1P-201ENST00000444577 975 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.16□□□□□ -1.58
SSX3Q99909 CFL1P4-201ENST00000451536 498 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 CCNJP2-201ENST00000457810 1163 ntBASIC5.16□□□□□ -1.58
SSX3Q99909 RN7SL170P-201ENST00000487098 295 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms