Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
IFT140Q96RY7 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
IFT140Q96RY7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
IFT140Q96RY7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
IFT140Q96RY7 RNA5SP505-201ENST00000364748 108 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 RPS16P5-201ENST00000406501 404 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 AC008072.1-201ENST00000434254 824 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.21□□□□□ -0.94
IFT140Q96RY7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC9.21□□□□□ -0.94
IFT140Q96RY7 AP002373.2-201ENST00000541631 1060 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.21□□□□□ -0.94
IFT140Q96RY7 EDDM3DP-201ENST00000554692 434 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 MIR4737-201ENST00000583979 81 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC9.21□□□□□ -0.94
IFT140Q96RY7 AL161616.1-201ENST00000611867 286 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 AC074101.1-201ENST00000637861 241 ntBASIC9.21□□□□□ -0.94
IFT140Q96RY7 MIPEPP2-201ENST00000422560 1819 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC011379.1-201ENST00000508713 3025 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 OR4K12P-201ENST00000406538 961 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC073581.1-201ENST00000519036 575 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC139697.1-201ENST00000548429 745 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC136624.4-201ENST00000573044 370 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC104687.2-201ENST00000604442 342 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC9.2□□□□□ -0.94
IFT140Q96RY7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
IFT140Q96RY7 AC010401.2-201ENST00000575137 4934 ntBASIC9.2□□□□□ -0.94
IFT140Q96RY7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
IFT140Q96RY7 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
IFT140Q96RY7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
IFT140Q96RY7 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.19□□□□□ -0.94
IFT140Q96RY7 RN7SKP95-201ENST00000362860 303 ntBASIC9.19□□□□□ -0.94
IFT140Q96RY7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 AC234781.3-201ENST00000452540 973 ntBASIC9.19□□□□□ -0.94
IFT140Q96RY7 AC092647.2-201ENST00000452998 253 ntBASIC9.19□□□□□ -0.94
IFT140Q96RY7 OR5AN2P-201ENST00000534535 896 ntBASIC9.19□□□□□ -0.94
IFT140Q96RY7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 AC016717.3-201ENST00000624730 554 ntBASIC9.19□□□□□ -0.94
IFT140Q96RY7 AL589993.1-201ENST00000407450 2524 ntBASIC9.19□□□□□ -0.94
IFT140Q96RY7 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
IFT140Q96RY7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
IFT140Q96RY7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
IFT140Q96RY7 BX322650.1-201ENST00000332359 2143 ntBASIC9.19□□□□□ -0.94
IFT140Q96RY7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 AC007161.1-204ENST00000423039 460 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 GAPDHP25-201ENST00000447061 1001 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 CSNK1A1P3-201ENST00000504105 330 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 IGHVII-44-2-201ENST00000517728 250 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 AC134698.5-201ENST00000519444 336 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 MIR6758-201ENST00000620653 63 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 AC012414.7-202ENST00000622705 1090 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 AC099494.2-201ENST00000623371 978 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
IFT140Q96RY7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
IFT140Q96RY7 AL162456.1-201ENST00000634535 2006 ntBASIC9.18□□□□□ -0.94
IFT140Q96RY7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms