Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 RPL23AP17-201ENST00000401064 499 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 TRIM60P17-201ENST00000415181 719 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AL354868.1-201ENST00000417077 482 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 MTCO2P1-201ENST00000424648 477 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 MTCO1P45-201ENST00000431457 267 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 MRPL50P1-201ENST00000431951 384 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 ELOCP3-201ENST00000439303 348 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 PCNPP2-201ENST00000441651 455 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 POU5F1P5-201ENST00000445059 658 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 Z83838.1-202ENST00000456225 839 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 H3F3AP5-201ENST00000475267 429 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC022415.1-202ENST00000486612 523 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC091965.3-201ENST00000506236 208 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 GUSBP9-201ENST00000510138 584 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC092868.3-201ENST00000560515 784 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC093510.2-201ENST00000562820 896 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC002310.3-201ENST00000569728 723 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC233702.7-202ENST00000582941 211 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 MIMT1-201ENST00000597105 1050 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC096947.1-201ENST00000603233 470 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AF129408.1-201ENST00000608767 431 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AC095038.2-201ENST00000621464 1070 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 AL138955.1-201ENST00000622881 1040 ntBASIC6.11□□□□□ -1.43
VPS50Q96JG6 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS50Q96JG6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VPS50Q96JG6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AP005435.3-201ENST00000531260 3198 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 SHQ1P1-201ENST00000437111 1544 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC092451.3-201ENST00000625067 1343 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 RNU1-65P-201ENST00000363919 148 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AL391419.1-201ENST00000398901 1275 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 MTATP6P31-201ENST00000406985 692 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC069282.1-201ENST00000411911 526 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 REREP1Y-201ENST00000422655 198 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 MORF4L1P7-201ENST00000426038 703 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 RAB9AP5-201ENST00000437794 597 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 REREP2Y-201ENST00000439103 200 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 RAB9AP2-201ENST00000443911 597 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 RN7SL254P-201ENST00000460609 284 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 RPL23AP73-201ENST00000492507 471 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 NPIPB14P-203ENST00000532298 987 ntBASIC6.1□□□□□ -1.43
VPS50Q96JG6 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS50Q96JG6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms