Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC008817.1-201ENST00000504215 1562 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC007923.2-201ENST00000584218 1591 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC009090.4-201ENST00000623921 3691 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 OFCC1-201ENST00000316020 863 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 RNU1-35P-201ENST00000362782 153 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 RNY3P3-201ENST00000363816 102 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 U3.14-201ENST00000365363 227 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 RNU6-31P-201ENST00000384388 108 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 RNU2-3P-201ENST00000410144 191 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 RN7SKP106-201ENST00000410832 272 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 BX295541.1-201ENST00000417774 250 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 FDPSP1-201ENST00000424976 1071 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 Z82205.1-201ENST00000428456 297 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 OR2B7P-201ENST00000429302 934 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 VDAC1P6-201ENST00000430062 855 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AF274573.1-201ENST00000430535 494 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 FAM96AP1-201ENST00000430879 482 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 RPL12P15-201ENST00000433385 499 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC002486.1-201ENST00000435098 391 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC097527.1-201ENST00000437031 530 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 RPL7P11-201ENST00000437586 658 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AL035407.2-201ENST00000454090 378 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 MTCO3P20-201ENST00000454926 688 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC098818.1-201ENST00000478593 252 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 RN7SL283P-201ENST00000489055 303 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 OR7E163P-201ENST00000505943 894 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 RNU7-30P-201ENST00000516835 62 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 Y_RNA.720-201ENST00000517166 92 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 IGJP1-201ENST00000522682 475 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 OR4A45P-201ENST00000529954 901 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 NDFIP1P1-201ENST00000543144 525 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 H3F3BP2-201ENST00000583907 357 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AL021918.1-201ENST00000603933 236 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 NUTF2P8-201ENST00000604593 363 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 OFCC1-217ENST00000611763 875 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 MIR6862-1-201ENST00000613016 70 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 MIR6862-2-201ENST00000614755 70 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 MIR6861-201ENST00000618657 64 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC139792.3-201ENST00000623525 224 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 OR9M1P-202ENST00000641564 3163 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC009053.1-202ENST00000563377 2051 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AL121936.1-201ENST00000641660 2884 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC023818.2-201ENST00000623817 2304 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.53□□□□□ -1.04
LRCH3Q96II8 AC009108.3-201ENST00000602739 3515 ntBASIC8.53□□□□□ -1.04
LRCH3Q96II8 AL136298.2-201ENST00000556497 1570 ntBASIC8.52□□□□□ -1.04
LRCH3Q96II8 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
LRCH3Q96II8 MAPK6PS3-201ENST00000403865 2162 ntBASIC8.52□□□□□ -1.04
LRCH3Q96II8 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
LRCH3Q96II8 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms