Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC027243.2-201ENST00000602530 724 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC027334.1-201ENST00000603257 310 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL023583.1-201ENST00000607518 1143 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL136131.3-201ENST00000607600 188 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC022106.1-201ENST00000612834 766 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL109620.1-201ENST00000618738 1197 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL118508.4-201ENST00000624142 1176 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 WDR95P-201ENST00000425638 1542 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC091305.2-201ENST00000624049 1576 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC022325.1-201ENST00000502748 2199 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 RNFT1P3-201ENST00000340898 1052 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC083799.1-201ENST00000366451 910 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 RNU11-201ENST00000387069 134 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AL121977.1-201ENST00000401636 979 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 MIR1203-201ENST00000408812 85 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC017078.1-201ENST00000416146 368 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 VN1R110P-201ENST00000438988 971 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 HMGN1P36-201ENST00000446623 298 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 RN7SL717P-201ENST00000478343 297 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 RPL7L1P4-201ENST00000513004 707 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC112191.2-201ENST00000522428 333 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 OR56A7P-201ENST00000524865 941 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC078878.1-201ENST00000539832 958 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC007225.2-201ENST00000562529 256 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AP005119.1-201ENST00000580956 292 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 NPIPB1P-202ENST00000588786 828 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AL360012.1-201ENST00000602813 131 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC008555.7-201ENST00000605008 583 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AL591167.1-201ENST00000607321 456 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AL391597.1-201ENST00000618707 694 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 MIR6886-201ENST00000619864 61 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 CIR1P2-201ENST00000514821 1342 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC106872.5-201ENST00000508856 1416 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 GNL2P1-201ENST00000451274 2190 ntBASIC5.63□□□□□ -1.51
TM9SF4Q92544 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TM9SF4Q92544 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.63□□□□□ -1.51
TM9SF4Q92544 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL137058.3-201ENST00000624531 3099 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC012254.3-201ENST00000591183 2117 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL359955.1-201ENST00000455242 3275 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.62□□□□□ -1.51
TM9SF4Q92544 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TM9SF4Q92544 TMSB4XP2-201ENST00000335179 210 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 SNORA43.1-201ENST00000364863 140 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AC087752.1-201ENST00000391360 558 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 AL445238.1-204ENST00000400311 463 ntBASIC5.62□□□□□ -1.51
TM9SF4Q92544 BX284632.2-201ENST00000421091 399 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms