Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL121839.2-201ENST00000565058 6943 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 RNA5SP346-201ENST00000363541 121 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 SNORD115-48-201ENST00000364764 76 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 RN7SKP81-201ENST00000365603 331 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 GCNT6-201ENST00000379591 934 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 ST13P16-201ENST00000401760 781 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 RN7SKP144-201ENST00000411108 279 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 ZNF965P-201ENST00000432501 817 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 RNF2P1-201ENST00000442955 1010 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 MTND6P32-201ENST00000457611 483 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 RARRES2P3-201ENST00000457739 473 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 RN7SL284P-201ENST00000498823 275 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC010468.3-201ENST00000508225 458 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 HMGB1P47-201ENST00000511281 589 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 VTA1P2-201ENST00000520205 911 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC113192.3-201ENST00000529152 742 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 TDGP1-201ENST00000543961 1229 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC008147.3-201ENST00000548666 354 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC019322.1-201ENST00000571869 389 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 ZNF92P2-201ENST00000600543 1059 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AC025857.2-201ENST00000602711 238 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 U91328.4-201ENST00000608919 517 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AL355816.2-201ENST00000610049 647 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 CR589904.2-201ENST00000612533 440 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 AL049777.1-201ENST00000622740 518 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 EIF3EP1-201ENST00000433978 1316 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 MTND4P9-201ENST00000507819 1346 ntBASIC5.42□□□□□ -1.54
SHFQ7M4L6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.42□□□□□ -1.54
SHFQ7M4L6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHFQ7M4L6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 CASC19-246ENST00000641625 1606 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC027279.4-201ENST00000624371 2072 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 CR382285.2-201ENST00000624662 1495 ntBASIC5.41□□□□□ -1.54
SHFQ7M4L6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHFQ7M4L6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.41□□□□□ -1.54
SHFQ7M4L6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms