Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AC011493.1-201ENST00000596753 1632 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 RN7SKP6-201ENST00000364795 319 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 RN7SL41P-201ENST00000476144 297 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AL359757.1-201ENST00000623176 255 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 CCDC162P-202ENST00000368966 6751 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AC105399.1-202ENST00000447303 205 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 CCDC58P3-201ENST00000590792 430 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AC011453.2-201ENST00000603737 729 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 MIR433-201ENST00000384837 93 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 PTCD2P2-201ENST00000415579 1095 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AC068287.1-201ENST00000430283 295 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 ACA64.4-201ENST00000459070 127 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 OR11I1P-201ENST00000486033 954 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 AC011447.6-201ENST00000623510 2598 ntBASIC5.56□□□□□ -1.52
RIF1Q5UIP0 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.56□□□□□ -1.52
RIF1Q5UIP0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 SNORA67-201ENST00000384423 137 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 SNORA11.2-201ENST00000408318 127 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC073594.1-201ENST00000462065 364 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 RPL26P30-202ENST00000602923 645 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AL953862.2-201ENST00000603089 820 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AP001521.2-201ENST00000608772 546 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AL161616.1-201ENST00000611867 286 ntBASIC5.55□□□□□ -1.52
RIF1Q5UIP0 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIF1Q5UIP0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms