Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC092725.2-201ENST00000567658 1389 ntBASIC7.04□□□□□ -1.28
PCDH1Q08174 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
PCDH1Q08174 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH1Q08174 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH1Q08174 AL136298.2-201ENST00000556497 1570 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
PCDH1Q08174 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 KARSP2-201ENST00000415696 1639 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 MTCO3P31-201ENST00000405526 789 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AL355862.1-201ENST00000412705 353 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 TPT1P2-201ENST00000413105 503 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 TCEA1P4-201ENST00000415066 844 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 RPS7P12-201ENST00000422385 582 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 Z68868.1-201ENST00000429048 544 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 MTND3P23-201ENST00000431980 347 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC234064.1-201ENST00000436312 247 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 EEF1E1P1-201ENST00000446998 430 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AL591379.2-201ENST00000450223 397 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AC079776.3-201ENST00000450665 370 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AL354872.1-201ENST00000456361 967 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 CTSLP6-201ENST00000458273 1002 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC108120.2-201ENST00000512973 294 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC109635.3-201ENST00000529536 185 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC092747.2-201ENST00000545069 983 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.03□□□□□ -1.28
PCDH1Q08174 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC004825.1-201ENST00000555068 586 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 TPRKBP2-201ENST00000565969 475 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC015801.1-201ENST00000585651 153 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AP001554.1-201ENST00000604533 376 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AC069545.1-201ENST00000605671 358 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 AP004607.9-201ENST00000618202 316 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AL356596.1-201ENST00000624230 379 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AC024023.1-201ENST00000624530 922 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 WASF5P-205ENST00000428639 1455 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PCDH1Q08174 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms