Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.57□□□□□ -1.52
LTBQ06643 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LTBQ06643 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LTBQ06643 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.56□□□□□ -1.52
LTBQ06643 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.56□□□□□ -1.52
LTBQ06643 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LTBQ06643 AP002512.4-202ENST00000641599 4530 ntBASIC5.56□□□□□ -1.52
LTBQ06643 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LTBQ06643 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LTBQ06643 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 AC015977.1-201ENST00000418887 292 ntBASIC5.56□□□□□ -1.52
LTBQ06643 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 AC066692.1-201ENST00000421721 457 ntBASIC5.56□□□□□ -1.52
LTBQ06643 RPSAP65-201ENST00000429660 595 ntBASIC5.56□□□□□ -1.52
LTBQ06643 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 AL691517.1-201ENST00000440833 1235 ntBASIC5.56□□□□□ -1.52
LTBQ06643 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.56□□□□□ -1.52
LTBQ06643 HIGD1AP16-201ENST00000450986 258 ntBASIC5.56□□□□□ -1.52
LTBQ06643 RPL5P12-201ENST00000477071 851 ntBASIC5.56□□□□□ -1.52
LTBQ06643 RPL34P33-201ENST00000486062 334 ntBASIC5.56□□□□□ -1.52
LTBQ06643 MTND3P24-201ENST00000506306 329 ntBASIC5.56□□□□□ -1.52
LTBQ06643 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.56□□□□□ -1.52
LTBQ06643 AC095052.1-201ENST00000509955 863 ntBASIC5.56□□□□□ -1.52
LTBQ06643 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 SCARNA1-201ENST00000517138 166 ntBASIC5.56□□□□□ -1.52
LTBQ06643 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.56□□□□□ -1.52
LTBQ06643 AC022826.1-201ENST00000519383 805 ntBASIC5.56□□□□□ -1.52
LTBQ06643 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.56□□□□□ -1.52
LTBQ06643 HNRNPRP2-201ENST00000528421 743 ntBASIC5.56□□□□□ -1.52
LTBQ06643 OR8X1P-201ENST00000534542 869 ntBASIC5.56□□□□□ -1.52
LTBQ06643 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.56□□□□□ -1.52
LTBQ06643 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.56□□□□□ -1.52
LTBQ06643 CYCSP38-201ENST00000559840 322 ntBASIC5.56□□□□□ -1.52
LTBQ06643 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.56□□□□□ -1.52
LTBQ06643 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.56□□□□□ -1.52
LTBQ06643 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 BNIP3P31-201ENST00000604515 566 ntBASIC5.56□□□□□ -1.52
LTBQ06643 AL021707.7-201ENST00000607991 416 ntBASIC5.56□□□□□ -1.52
LTBQ06643 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 AL162233.1-201ENST00000620014 944 ntBASIC5.56□□□□□ -1.52
LTBQ06643 AC091046.2-201ENST00000620775 665 ntBASIC5.56□□□□□ -1.52
LTBQ06643 AC069234.4-201ENST00000621276 412 ntBASIC5.56□□□□□ -1.52
LTBQ06643 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.56□□□□□ -1.52
LTBQ06643 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 HSPA8P19-201ENST00000505359 1517 ntBASIC5.56□□□□□ -1.52
LTBQ06643 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
LTBQ06643 AL359091.1-201ENST00000449048 1734 ntBASIC5.56□□□□□ -1.52
LTBQ06643 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
LTBQ06643 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 AC093225.1-201ENST00000506867 1408 ntBASIC5.56□□□□□ -1.52
LTBQ06643 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LTBQ06643 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.56□□□□□ -1.52
LTBQ06643 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 MTCO1P22-201ENST00000604619 1360 ntBASIC5.55□□□□□ -1.52
LTBQ06643 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.55□□□□□ -1.52
LTBQ06643 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.55□□□□□ -1.52
LTBQ06643 AC011416.1-201ENST00000514947 1732 ntBASIC5.55□□□□□ -1.52
LTBQ06643 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 TMSB4XP4-201ENST00000323496 618 ntBASIC5.55□□□□□ -1.52
LTBQ06643 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
LTBQ06643 UBE2V1P15-201ENST00000407776 448 ntBASIC5.55□□□□□ -1.52
LTBQ06643 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 AL353718.1-201ENST00000451028 517 ntBASIC5.55□□□□□ -1.52
LTBQ06643 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 FCF1P6-201ENST00000456841 595 ntBASIC5.55□□□□□ -1.52
LTBQ06643 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LTBQ06643 AP002453.1-201ENST00000492327 668 ntBASIC5.55□□□□□ -1.52
LTBQ06643 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
LTBQ06643 ZNF519P4-201ENST00000514008 125 ntBASIC5.55□□□□□ -1.52
LTBQ06643 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.55□□□□□ -1.52
LTBQ06643 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.55□□□□□ -1.52
LTBQ06643 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.55□□□□□ -1.52
LTBQ06643 AC234775.3-201ENST00000564612 656 ntBASIC5.55□□□□□ -1.52
LTBQ06643 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 MIR4420-201ENST00000583944 77 ntBASIC5.55□□□□□ -1.52
LTBQ06643 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.55□□□□□ -1.52
LTBQ06643 RPSAP75-201ENST00000605848 301 ntBASIC5.55□□□□□ -1.52
LTBQ06643 AC141002.1-201ENST00000607025 279 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms