Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 CDC42P3-201ENST00000518493 633 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AC135983.3-201ENST00000528049 1226 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 AC091078.2-201ENST00000557145 559 ntBASIC4.37□□□□□ -1.71
CCL20P78556 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.37□□□□□ -1.71
CCL20P78556 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
CCL20P78556 MIR6849-201ENST00000618543 69 ntBASIC4.37□□□□□ -1.71
CCL20P78556 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.37□□□□□ -1.71
CCL20P78556 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 NR1H5P-201ENST00000452683 1377 ntBASIC4.37□□□□□ -1.71
CCL20P78556 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 GNL2P1-201ENST00000451274 2190 ntBASIC4.37□□□□□ -1.71
CCL20P78556 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.37□□□□□ -1.71
CCL20P78556 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCL20P78556 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.37□□□□□ -1.71
CCL20P78556 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.37□□□□□ -1.71
CCL20P78556 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 AC007842.1-201ENST00000597336 2039 ntBASIC4.36□□□□□ -1.71
CCL20P78556 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 RPL11P4-201ENST00000332269 436 ntBASIC4.36□□□□□ -1.71
CCL20P78556 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCL20P78556 SNORA48.4-201ENST00000391089 134 ntBASIC4.36□□□□□ -1.71
CCL20P78556 RPL35AP3-201ENST00000414680 288 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.36□□□□□ -1.71
CCL20P78556 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.36□□□□□ -1.71
CCL20P78556 ELOBP4-201ENST00000423418 296 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AC130360.1-201ENST00000425489 1117 ntBASIC4.36□□□□□ -1.71
CCL20P78556 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 AC017019.1-201ENST00000426129 261 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.36□□□□□ -1.71
CCL20P78556 DEFA9P-201ENST00000433042 285 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.36□□□□□ -1.71
CCL20P78556 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 BMS1P10-201ENST00000443754 1120 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 AL139135.2-201ENST00000445040 433 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AL590004.3-202ENST00000445883 451 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 RPS18P1-201ENST00000447840 458 ntBASIC4.36□□□□□ -1.71
CCL20P78556 RN7SL269P-201ENST00000467795 305 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AC023245.1-201ENST00000468501 517 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.36□□□□□ -1.71
CCL20P78556 GOLGA5P1-201ENST00000507317 980 ntBASIC4.36□□□□□ -1.71
CCL20P78556 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 CR383658.1-201ENST00000514609 734 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.36□□□□□ -1.71
CCL20P78556 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.36□□□□□ -1.71
CCL20P78556 AC130365.2-201ENST00000525882 1201 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.36□□□□□ -1.71
CCL20P78556 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCL20P78556 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.36□□□□□ -1.71
CCL20P78556 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CCL20P78556 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 AC096996.1-201ENST00000563813 325 ntBASIC4.36□□□□□ -1.71
CCL20P78556 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.36□□□□□ -1.71
CCL20P78556 MIR3157-201ENST00000578688 85 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 AL589765.6-201ENST00000601909 549 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AC036176.3-201ENST00000602456 418 ntBASIC4.36□□□□□ -1.71
CCL20P78556 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 AL139099.4-201ENST00000614802 114 ntBASIC4.36□□□□□ -1.71
CCL20P78556 uc_338.7-201ENST00000621834 124 ntBASIC4.36□□□□□ -1.71
CCL20P78556 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 AC073869.10-201ENST00000642016 354 ntBASIC4.36□□□□□ -1.71
CCL20P78556 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCL20P78556 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CCL20P78556 AC011447.7-201ENST00000624228 1590 ntBASIC4.36□□□□□ -1.71
CCL20P78556 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.35□□□□□ -1.71
CCL20P78556 AC004023.1-201ENST00000561473 1744 ntBASIC4.35□□□□□ -1.71
CCL20P78556 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCL20P78556 OR55B1P-203ENST00000641518 2602 ntBASIC4.35□□□□□ -1.71
CCL20P78556 AL731566.1-201ENST00000620490 1937 ntBASIC4.35□□□□□ -1.71
CCL20P78556 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCL20P78556 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCL20P78556 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCL20P78556 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCL20P78556 RNA5SP110-201ENST00000362638 115 ntBASIC4.35□□□□□ -1.71
CCL20P78556 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.35□□□□□ -1.71
CCL20P78556 MRPL53P1-201ENST00000414323 319 ntBASIC4.35□□□□□ -1.71
CCL20P78556 NIFKP3-201ENST00000417799 865 ntBASIC4.35□□□□□ -1.71
CCL20P78556 RBMY2JP-201ENST00000425544 1059 ntBASIC4.35□□□□□ -1.71
CCL20P78556 FECHP1-201ENST00000431896 1214 ntBASIC4.35□□□□□ -1.71
CCL20P78556 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.35□□□□□ -1.71
CCL20P78556 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCL20P78556 AL645936.1-201ENST00000441979 518 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms