Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.77□□□□□ -1.49
RAE1P78406 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.77□□□□□ -1.49
RAE1P78406 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.77□□□□□ -1.49
RAE1P78406 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 AL121977.1-201ENST00000401636 979 ntBASIC5.77□□□□□ -1.49
RAE1P78406 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 RN7SKP146-201ENST00000410242 334 ntBASIC5.77□□□□□ -1.49
RAE1P78406 RN7SKP166-201ENST00000410812 305 ntBASIC5.77□□□□□ -1.49
RAE1P78406 VN1R51P-201ENST00000411675 945 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 USP24P1-201ENST00000433802 779 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AC046176.1-201ENST00000435260 1170 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 AL390879.1-201ENST00000439143 386 ntBASIC5.77□□□□□ -1.49
RAE1P78406 RNFT1P2-201ENST00000443064 757 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 OR7E22P-201ENST00000478335 1035 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 RBBP4P1-201ENST00000502424 1276 ntBASIC5.77□□□□□ -1.49
RAE1P78406 CCDC11P1-201ENST00000503137 1162 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 AC121161.1-201ENST00000510606 652 ntBASIC5.77□□□□□ -1.49
RAE1P78406 MRPS5P3-201ENST00000515577 166 ntBASIC5.77□□□□□ -1.49
RAE1P78406 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 AC026407.1-201ENST00000518369 204 ntBASIC5.77□□□□□ -1.49
RAE1P78406 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RAE1P78406 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.77□□□□□ -1.49
RAE1P78406 GTF2IP11-201ENST00000526931 420 ntBASIC5.77□□□□□ -1.49
RAE1P78406 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.77□□□□□ -1.49
RAE1P78406 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.77□□□□□ -1.49
RAE1P78406 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.77□□□□□ -1.49
RAE1P78406 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
RAE1P78406 AL592494.3-201ENST00000609485 464 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AL135999.3-201ENST00000610501 812 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AL136097.3-201ENST00000611097 505 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AC004241.3-201ENST00000611728 517 ntBASIC5.77□□□□□ -1.49
RAE1P78406 HTR1DP1-201ENST00000616500 888 ntBASIC5.77□□□□□ -1.49
RAE1P78406 AC096861.1-201ENST00000616652 240 ntBASIC5.77□□□□□ -1.49
RAE1P78406 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 OR52B5P-204ENST00000641744 3467 ntBASIC5.77□□□□□ -1.49
RAE1P78406 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RAE1P78406 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAE1P78406 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.76□□□□□ -1.49
RAE1P78406 AP003486.1-201ENST00000525716 3994 ntBASIC5.76□□□□□ -1.49
RAE1P78406 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RAE1P78406 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 AC093909.5-201ENST00000621839 1799 ntBASIC5.76□□□□□ -1.49
RAE1P78406 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 RAD1P1-201ENST00000231383 813 ntBASIC5.76□□□□□ -1.49
RAE1P78406 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RAE1P78406 SNORA21-201ENST00000362423 132 ntBASIC5.76□□□□□ -1.49
RAE1P78406 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 RNU6-316P-201ENST00000391027 107 ntBASIC5.76□□□□□ -1.49
RAE1P78406 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.76□□□□□ -1.49
RAE1P78406 RNA5SP156-201ENST00000410250 110 ntBASIC5.76□□□□□ -1.49
RAE1P78406 RNU4-27P-201ENST00000410889 139 ntBASIC5.76□□□□□ -1.49
RAE1P78406 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 NIFKP3-201ENST00000417799 865 ntBASIC5.76□□□□□ -1.49
RAE1P78406 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 MTND4LP13-201ENST00000425022 298 ntBASIC5.76□□□□□ -1.49
RAE1P78406 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.76□□□□□ -1.49
RAE1P78406 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 AL096829.2-201ENST00000446582 742 ntBASIC5.76□□□□□ -1.49
RAE1P78406 AL627224.1-201ENST00000448334 444 ntBASIC5.76□□□□□ -1.49
RAE1P78406 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 KF459542.1-201ENST00000450908 553 ntBASIC5.76□□□□□ -1.49
RAE1P78406 AC073476.1-201ENST00000452854 407 ntBASIC5.76□□□□□ -1.49
RAE1P78406 SDC4P-201ENST00000453285 601 ntBASIC5.76□□□□□ -1.49
RAE1P78406 RPS3AP53-201ENST00000454716 778 ntBASIC5.76□□□□□ -1.49
RAE1P78406 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.76□□□□□ -1.49
RAE1P78406 UBE2V1P12-201ENST00000503954 474 ntBASIC5.76□□□□□ -1.49
RAE1P78406 AC114322.1-201ENST00000506771 926 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms