Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AL359839.1-201ENST00000451975 1160 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 RN7SL570P-201ENST00000484405 292 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 RPS7P6-201ENST00000485777 579 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 OR7E157P-201ENST00000494376 911 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 Y_RNA.667-201ENST00000516212 107 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 RNA5SP438-201ENST00000516561 112 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC027369.2-201ENST00000528030 440 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 HMGN2P36-201ENST00000529541 409 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC016839.1-201ENST00000578162 867 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 MIR7109-201ENST00000613748 65 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC073592.6-201ENST00000624271 415 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST1H3AP68431 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 AC125336.1-201ENST00000508893 2827 ntBASIC5.04□□□□□ -1.6
HIST1H3AP68431 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST1H3AP68431 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST1H3AP68431 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIST1H3AP68431 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC083899.1-201ENST00000454465 3819 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIST1H3AP68431 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIST1H3AP68431 MIR130A-201ENST00000385274 89 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC087752.1-201ENST00000391360 558 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 MIR1203-201ENST00000408812 85 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AL357752.1-201ENST00000412817 349 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 MRPL53P1-201ENST00000414323 319 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 NIFKP3-201ENST00000417799 865 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 RPS23P9-201ENST00000448848 438 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC073610.1-201ENST00000489971 396 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 NPM1P28-201ENST00000492269 840 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 OR5H7P-201ENST00000514084 930 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC021146.10-201ENST00000515628 706 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC011853.1-201ENST00000518911 454 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC024405.1-201ENST00000532521 1042 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 MIR4260-201ENST00000583107 67 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC010487.1-201ENST00000594408 1172 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 MIR6780B-201ENST00000610307 79 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC073593.1-201ENST00000624500 411 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC079776.5-201ENST00000641920 211 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 AC012078.1-201ENST00000405035 1646 ntBASIC5.03□□□□□ -1.6
HIST1H3AP68431 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIST1H3AP68431 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIST1H3AP68431 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
HIST1H3AP68431 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
HIST1H3AP68431 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.02□□□□□ -1.61
HIST1H3AP68431 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HIST1H3AP68431 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.02□□□□□ -1.61
HIST1H3AP68431 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HIST1H3AP68431 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.02□□□□□ -1.61
HIST1H3AP68431 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HIST1H3AP68431 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.02□□□□□ -1.61
HIST1H3AP68431 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HIST1H3AP68431 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HIST1H3AP68431 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HIST1H3AP68431 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HIST1H3AP68431 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms