Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.56□□□□□ -1.52
VSX2P58304 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 MFSD8-219ENST00000641228 2559 ntBASIC5.56□□□□□ -1.52
VSX2P58304 MIR375-201ENST00000362103 64 ntBASIC5.56□□□□□ -1.52
VSX2P58304 SNORD1C-201ENST00000363315 78 ntBASIC5.56□□□□□ -1.52
VSX2P58304 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.56□□□□□ -1.52
VSX2P58304 AL031985.1-201ENST00000392713 418 ntBASIC5.56□□□□□ -1.52
VSX2P58304 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.56□□□□□ -1.52
VSX2P58304 NAP1L4P2-201ENST00000425958 899 ntBASIC5.56□□□□□ -1.52
VSX2P58304 BX119321.1-201ENST00000428912 797 ntBASIC5.56□□□□□ -1.52
VSX2P58304 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.56□□□□□ -1.52
VSX2P58304 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 RPL36AP39-201ENST00000445859 318 ntBASIC5.56□□□□□ -1.52
VSX2P58304 REG1CP-206ENST00000447469 496 ntBASIC5.56□□□□□ -1.52
VSX2P58304 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.56□□□□□ -1.52
VSX2P58304 RPL31P15-201ENST00000449770 338 ntBASIC5.56□□□□□ -1.52
VSX2P58304 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.56□□□□□ -1.52
VSX2P58304 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 MIR3614-201ENST00000581261 86 ntBASIC5.56□□□□□ -1.52
VSX2P58304 AC015802.2-201ENST00000589690 189 ntBASIC5.56□□□□□ -1.52
VSX2P58304 AC008691.1-209ENST00000642094 814 ntBASIC5.56□□□□□ -1.52
VSX2P58304 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 AC025470.1-201ENST00000510053 2032 ntBASIC5.56□□□□□ -1.52
VSX2P58304 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 AC015689.2-201ENST00000528172 1738 ntBASIC5.56□□□□□ -1.52
VSX2P58304 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VSX2P58304 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VSX2P58304 AL161756.3-201ENST00000641216 2071 ntBASIC5.55□□□□□ -1.52
VSX2P58304 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 TMSB4XP4-201ENST00000323496 618 ntBASIC5.55□□□□□ -1.52
VSX2P58304 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 RPL23AP17-201ENST00000401064 499 ntBASIC5.55□□□□□ -1.52
VSX2P58304 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.55□□□□□ -1.52
VSX2P58304 AC092651.1-201ENST00000426110 312 ntBASIC5.55□□□□□ -1.52
VSX2P58304 MTND6P12-201ENST00000428247 522 ntBASIC5.55□□□□□ -1.52
VSX2P58304 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 SETP20-201ENST00000457046 852 ntBASIC5.55□□□□□ -1.52
VSX2P58304 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.55□□□□□ -1.52
VSX2P58304 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.55□□□□□ -1.52
VSX2P58304 TRBV5-2-201ENST00000489095 273 ntBASIC5.55□□□□□ -1.52
VSX2P58304 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 NENFP3-201ENST00000503735 313 ntBASIC5.55□□□□□ -1.52
VSX2P58304 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.55□□□□□ -1.52
VSX2P58304 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.55□□□□□ -1.52
VSX2P58304 MTATP6P1-201ENST00000514057 681 ntBASIC5.55□□□□□ -1.52
VSX2P58304 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 AC112191.2-201ENST00000522428 333 ntBASIC5.55□□□□□ -1.52
VSX2P58304 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 AC090424.1-201ENST00000535243 736 ntBASIC5.55□□□□□ -1.52
VSX2P58304 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.55□□□□□ -1.52
VSX2P58304 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
VSX2P58304 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.55□□□□□ -1.52
VSX2P58304 MIR4260-201ENST00000583107 67 ntBASIC5.55□□□□□ -1.52
VSX2P58304 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.55□□□□□ -1.52
VSX2P58304 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 AC093388.1-201ENST00000609166 430 ntBASIC5.55□□□□□ -1.52
VSX2P58304 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 AL355974.3-201ENST00000617383 467 ntBASIC5.55□□□□□ -1.52
VSX2P58304 AP000550.3-201ENST00000637734 379 ntBASIC5.55□□□□□ -1.52
VSX2P58304 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
VSX2P58304 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VSX2P58304 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.55□□□□□ -1.52
VSX2P58304 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VSX2P58304 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VSX2P58304 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VSX2P58304 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.54□□□□□ -1.52
VSX2P58304 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.54□□□□□ -1.52
VSX2P58304 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VSX2P58304 AL442128.2-201ENST00000620246 1824 ntBASIC5.54□□□□□ -1.52
VSX2P58304 AL121839.2-201ENST00000565058 6943 ntBASIC5.54□□□□□ -1.52
VSX2P58304 RN7SKP292-201ENST00000365522 317 ntBASIC5.54□□□□□ -1.52
VSX2P58304 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.54□□□□□ -1.52
VSX2P58304 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VSX2P58304 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms