Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 AC068768.2-201ENST00000602352 343 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC092953.2-201ENST00000608000 699 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 AC003992.1-201ENST00000635364 557 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLDN20P56880 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN20P56880 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 AP000473.2-201ENST00000602659 1537 ntBASIC5.52□□□□□ -1.53
CLDN20P56880 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CLDN20P56880 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN20P56880 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN20P56880 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 AL121768.1-201ENST00000613917 2544 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AC008627.1-201ENST00000517511 1704 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
CLDN20P56880 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLDN20P56880 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLDN20P56880 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 RNU6-697P-201ENST00000363348 107 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AL353625.1-202ENST00000366273 571 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLDN20P56880 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 RN7SKP240-201ENST00000410583 375 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.51□□□□□ -1.53
CLDN20P56880 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 RPL35AP31-201ENST00000418340 337 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 RPL17P35-201ENST00000432217 549 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 USP24P1-201ENST00000433802 779 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 MRPS33P4-201ENST00000434892 317 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AL590399.4-201ENST00000436561 601 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 SDR42E1P3-201ENST00000438345 502 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 AL512593.1-201ENST00000444758 779 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN20P56880 OSTCP1-201ENST00000455507 450 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC068228.1-201ENST00000461723 211 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN20P56880 ST13P12-201ENST00000508958 1094 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.51□□□□□ -1.53
CLDN20P56880 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN20P56880 AC141002.1-201ENST00000607025 279 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 AC138907.8-201ENST00000623981 2256 ntBASIC5.51□□□□□ -1.53
CLDN20P56880 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN20P56880 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN20P56880 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN20P56880 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLDN20P56880 AC016745.2-201ENST00000608834 3443 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
CLDN20P56880 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLDN20P56880 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 AC087565.3-202ENST00000642085 1603 ntBASIC5.5□□□□□ -1.53
CLDN20P56880 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN20P56880 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLDN20P56880 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN20P56880 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN20P56880 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms