Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 AL137058.3-201ENST00000624531 3099 ntBASIC6.37□□□□□ -1.39
VCPP55072 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
VCPP55072 AC022164.1-201ENST00000568767 2673 ntBASIC6.37□□□□□ -1.39
VCPP55072 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.37□□□□□ -1.39
VCPP55072 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 OR4G1P-202ENST00000641173 1788 ntBASIC6.37□□□□□ -1.39
VCPP55072 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.37□□□□□ -1.39
VCPP55072 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VCPP55072 GAPDHP24-201ENST00000328713 983 ntBASIC6.37□□□□□ -1.39
VCPP55072 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.37□□□□□ -1.39
VCPP55072 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.37□□□□□ -1.39
VCPP55072 AC093155.2-201ENST00000420734 937 ntBASIC6.37□□□□□ -1.39
VCPP55072 BX284632.2-201ENST00000421091 399 ntBASIC6.37□□□□□ -1.39
VCPP55072 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.37□□□□□ -1.39
VCPP55072 VN1R110P-201ENST00000438988 971 ntBASIC6.37□□□□□ -1.39
VCPP55072 AL512605.1-202ENST00000441919 381 ntBASIC6.37□□□□□ -1.39
VCPP55072 AL359955.2-201ENST00000445380 353 ntBASIC6.37□□□□□ -1.39
VCPP55072 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.37□□□□□ -1.39
VCPP55072 AC090958.1-201ENST00000511122 351 ntBASIC6.37□□□□□ -1.39
VCPP55072 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.37□□□□□ -1.39
VCPP55072 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.37□□□□□ -1.39
VCPP55072 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.37□□□□□ -1.39
VCPP55072 MIR4433B-201ENST00000581329 102 ntBASIC6.37□□□□□ -1.39
VCPP55072 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.37□□□□□ -1.39
VCPP55072 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.37□□□□□ -1.39
VCPP55072 RPL12P48-201ENST00000605620 304 ntBASIC6.37□□□□□ -1.39
VCPP55072 MIR6809-201ENST00000612189 116 ntBASIC6.37□□□□□ -1.39
VCPP55072 AC021766.1-201ENST00000624404 741 ntBASIC6.37□□□□□ -1.39
VCPP55072 MIR193BHG-214ENST00000641765 509 ntBASIC6.37□□□□□ -1.39
VCPP55072 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VCPP55072 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 AC022325.1-201ENST00000502748 2199 ntBASIC6.37□□□□□ -1.39
VCPP55072 AC024651.2-201ENST00000562480 2098 ntBASIC6.37□□□□□ -1.39
VCPP55072 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VCPP55072 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.37□□□□□ -1.39
VCPP55072 AC119674.1-202ENST00000641333 1860 ntBASIC6.36□□□□□ -1.39
VCPP55072 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 WDR95P-201ENST00000425638 1542 ntBASIC6.36□□□□□ -1.39
VCPP55072 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 RBMY1HP-201ENST00000382759 1389 ntBASIC6.36□□□□□ -1.39
VCPP55072 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 AC103591.2-201ENST00000265259 766 ntBASIC6.36□□□□□ -1.39
VCPP55072 NACAP7-201ENST00000407371 609 ntBASIC6.36□□□□□ -1.39
VCPP55072 RPS7P8-201ENST00000418311 581 ntBASIC6.36□□□□□ -1.39
VCPP55072 RPA2P2-201ENST00000419698 796 ntBASIC6.36□□□□□ -1.39
VCPP55072 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.36□□□□□ -1.39
VCPP55072 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 AL365220.1-201ENST00000432923 399 ntBASIC6.36□□□□□ -1.39
VCPP55072 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 AL512593.1-201ENST00000444758 779 ntBASIC6.36□□□□□ -1.39
VCPP55072 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.36□□□□□ -1.39
VCPP55072 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 RAB28P2-201ENST00000454299 641 ntBASIC6.36□□□□□ -1.39
VCPP55072 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.36□□□□□ -1.39
VCPP55072 AL133445.1-201ENST00000467051 452 ntBASIC6.36□□□□□ -1.39
VCPP55072 UBA52P7-201ENST00000486088 380 ntBASIC6.36□□□□□ -1.39
VCPP55072 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.36□□□□□ -1.39
VCPP55072 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.36□□□□□ -1.39
VCPP55072 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
VCPP55072 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.36□□□□□ -1.39
VCPP55072 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 AC004808.2-201ENST00000627965 773 ntBASIC6.36□□□□□ -1.39
VCPP55072 OR8G3P-202ENST00000641572 1255 ntBASIC6.36□□□□□ -1.39
VCPP55072 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
VCPP55072 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
VCPP55072 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VCPP55072 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VCPP55072 AL590763.1-201ENST00000398297 1545 ntBASIC6.35□□□□□ -1.39
VCPP55072 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
VCPP55072 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.35□□□□□ -1.39
VCPP55072 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
VCPP55072 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms