Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PDX1P52945 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
PDX1P52945 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.74□□□□□ -1.49
PDX1P52945 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDX1P52945 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
PDX1P52945 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PDX1P52945 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDX1P52945 RN7SKP128-201ENST00000364270 303 ntBASIC5.74□□□□□ -1.49
PDX1P52945 RNA5SP132-201ENST00000364725 118 ntBASIC5.74□□□□□ -1.49
PDX1P52945 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDX1P52945 NPM1P10-201ENST00000398310 865 ntBASIC5.74□□□□□ -1.49
PDX1P52945 AL050305.1-201ENST00000399993 1230 ntBASIC5.74□□□□□ -1.49
PDX1P52945 AC016739.1-201ENST00000405359 345 ntBASIC5.74□□□□□ -1.49
PDX1P52945 SNRPEP6-201ENST00000407465 277 ntBASIC5.74□□□□□ -1.49
PDX1P52945 RN7SKP151-201ENST00000410230 316 ntBASIC5.74□□□□□ -1.49
PDX1P52945 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.74□□□□□ -1.49
PDX1P52945 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.74□□□□□ -1.49
PDX1P52945 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.74□□□□□ -1.49
PDX1P52945 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PDX1P52945 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.74□□□□□ -1.49
PDX1P52945 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.74□□□□□ -1.49
PDX1P52945 RPL7L1P3-201ENST00000455249 689 ntBASIC5.74□□□□□ -1.49
PDX1P52945 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.74□□□□□ -1.49
PDX1P52945 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.74□□□□□ -1.49
PDX1P52945 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.74□□□□□ -1.49
PDX1P52945 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.74□□□□□ -1.49
PDX1P52945 AP001804.1-201ENST00000526868 919 ntBASIC5.74□□□□□ -1.49
PDX1P52945 HNRNPRP2-201ENST00000528421 743 ntBASIC5.74□□□□□ -1.49
PDX1P52945 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 AP001496.3-201ENST00000580230 913 ntBASIC5.74□□□□□ -1.49
PDX1P52945 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.74□□□□□ -1.49
PDX1P52945 AC016911.1-201ENST00000613297 452 ntBASIC5.74□□□□□ -1.49
PDX1P52945 MTCO1P1-201ENST00000624263 1081 ntBASIC5.74□□□□□ -1.49
PDX1P52945 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.74□□□□□ -1.49
PDX1P52945 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
PDX1P52945 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 ZNF402P-201ENST00000404435 3100 ntBASIC5.74□□□□□ -1.49
PDX1P52945 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDX1P52945 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PDX1P52945 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PDX1P52945 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 PDZK1P1-202ENST00000425209 1350 ntBASIC5.73□□□□□ -1.49
PDX1P52945 AC005225.5-201ENST00000623547 2225 ntBASIC5.73□□□□□ -1.49
PDX1P52945 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 RN7SKP160-201ENST00000363804 340 ntBASIC5.73□□□□□ -1.49
PDX1P52945 HMGB1P20-201ENST00000402555 677 ntBASIC5.73□□□□□ -1.49
PDX1P52945 AC015977.1-201ENST00000418887 292 ntBASIC5.73□□□□□ -1.49
PDX1P52945 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.73□□□□□ -1.49
PDX1P52945 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.73□□□□□ -1.49
PDX1P52945 AC002504.1-201ENST00000438281 691 ntBASIC5.73□□□□□ -1.49
PDX1P52945 AC073909.1-201ENST00000447112 999 ntBASIC5.73□□□□□ -1.49
PDX1P52945 MYO5BP2-201ENST00000449815 1277 ntBASIC5.73□□□□□ -1.49
PDX1P52945 AC093166.4-201ENST00000457867 318 ntBASIC5.73□□□□□ -1.49
PDX1P52945 RPS23P6-201ENST00000466136 431 ntBASIC5.73□□□□□ -1.49
PDX1P52945 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.73□□□□□ -1.49
PDX1P52945 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 RN7SL57P-201ENST00000493687 290 ntBASIC5.73□□□□□ -1.49
PDX1P52945 RN7SL466P-201ENST00000497546 295 ntBASIC5.73□□□□□ -1.49
PDX1P52945 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.73□□□□□ -1.49
PDX1P52945 OR56A7P-201ENST00000524865 941 ntBASIC5.73□□□□□ -1.49
PDX1P52945 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 HMGN2P36-201ENST00000529541 409 ntBASIC5.73□□□□□ -1.49
PDX1P52945 OR6M2P-201ENST00000529831 871 ntBASIC5.73□□□□□ -1.49
PDX1P52945 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.73□□□□□ -1.49
PDX1P52945 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.73□□□□□ -1.49
PDX1P52945 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.73□□□□□ -1.49
PDX1P52945 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.73□□□□□ -1.49
PDX1P52945 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.73□□□□□ -1.49
PDX1P52945 AC091078.2-201ENST00000557145 559 ntBASIC5.73□□□□□ -1.49
PDX1P52945 AL352984.2-202ENST00000613699 155 ntBASIC5.73□□□□□ -1.49
PDX1P52945 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PDX1P52945 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.73□□□□□ -1.49
PDX1P52945 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.73□□□□□ -1.49
PDX1P52945 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PDX1P52945 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDX1P52945 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PDX1P52945 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.72□□□□□ -1.49
PDX1P52945 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.72□□□□□ -1.49
PDX1P52945 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDX1P52945 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms