Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
MSH6P52701 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH6P52701 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH6P52701 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
MSH6P52701 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.96□□□□□ -1.14
MSH6P52701 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.96□□□□□ -1.14
MSH6P52701 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH6P52701 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.96□□□□□ -1.14
MSH6P52701 AL360271.1-201ENST00000395679 510 ntBASIC7.96□□□□□ -1.14
MSH6P52701 AC013442.1-201ENST00000397347 228 ntBASIC7.96□□□□□ -1.14
MSH6P52701 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.96□□□□□ -1.14
MSH6P52701 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.96□□□□□ -1.14
MSH6P52701 AK3P5-201ENST00000432033 519 ntBASIC7.96□□□□□ -1.14
MSH6P52701 AC091390.1-201ENST00000433904 331 ntBASIC7.96□□□□□ -1.14
MSH6P52701 OR13K1P-201ENST00000444577 975 ntBASIC7.96□□□□□ -1.14
MSH6P52701 CT45A11P-201ENST00000448043 1134 ntBASIC7.96□□□□□ -1.14
MSH6P52701 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.96□□□□□ -1.14
MSH6P52701 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.96□□□□□ -1.14
MSH6P52701 RN7SL165P-201ENST00000477476 291 ntBASIC7.96□□□□□ -1.14
MSH6P52701 AC023818.1-201ENST00000498379 384 ntBASIC7.96□□□□□ -1.14
MSH6P52701 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.96□□□□□ -1.14
MSH6P52701 PRELID3BP5-201ENST00000508612 460 ntBASIC7.96□□□□□ -1.14
MSH6P52701 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.96□□□□□ -1.14
MSH6P52701 AL512310.9-201ENST00000553311 948 ntBASIC7.96□□□□□ -1.14
MSH6P52701 AC079075.1-201ENST00000559543 878 ntBASIC7.96□□□□□ -1.14
MSH6P52701 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.96□□□□□ -1.14
MSH6P52701 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH6P52701 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH6P52701 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH6P52701 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH6P52701 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH6P52701 OR4A40P-201ENST00000533878 948 ntBASIC7.95□□□□□ -1.14
MSH6P52701 HSPE1P2-201ENST00000554777 306 ntBASIC7.95□□□□□ -1.14
MSH6P52701 AC018552.1-201ENST00000562099 811 ntBASIC7.95□□□□□ -1.14
MSH6P52701 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH6P52701 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
MSH6P52701 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH6P52701 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.94□□□□□ -1.14
MSH6P52701 IMMTP1-201ENST00000435590 2219 ntBASIC7.94□□□□□ -1.14
MSH6P52701 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
MSH6P52701 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 PANDAR-201ENST00000629595 1506 ntBASIC7.94□□□□□ -1.14
MSH6P52701 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
MSH6P52701 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
MSH6P52701 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
MSH6P52701 AL353626.3-201ENST00000413399 657 ntBASIC7.94□□□□□ -1.14
MSH6P52701 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.94□□□□□ -1.14
MSH6P52701 AC245028.1-201ENST00000423259 256 ntBASIC7.94□□□□□ -1.14
MSH6P52701 AL360081.1-201ENST00000428299 555 ntBASIC7.94□□□□□ -1.14
MSH6P52701 AC006335.2-201ENST00000437993 330 ntBASIC7.94□□□□□ -1.14
MSH6P52701 AL022237.1-201ENST00000446663 358 ntBASIC7.94□□□□□ -1.14
MSH6P52701 RN7SL738P-201ENST00000470264 297 ntBASIC7.94□□□□□ -1.14
MSH6P52701 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.94□□□□□ -1.14
MSH6P52701 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.94□□□□□ -1.14
MSH6P52701 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.94□□□□□ -1.14
MSH6P52701 TPM3P3-201ENST00000521343 354 ntBASIC7.94□□□□□ -1.14
MSH6P52701 AC013701.1-201ENST00000522657 465 ntBASIC7.94□□□□□ -1.14
MSH6P52701 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
MSH6P52701 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.94□□□□□ -1.14
MSH6P52701 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.94□□□□□ -1.14
MSH6P52701 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms