Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PPIAP24-201ENST00000328558 471 ntBASIC7.56□□□□□ -1.2
USP11P51784 RNU4-4P-201ENST00000364588 130 ntBASIC7.56□□□□□ -1.2
USP11P51784 OR5H15-201ENST00000383696 930 ntBASIC7.56□□□□□ -1.2
USP11P51784 RNU5A-2P-201ENST00000384337 116 ntBASIC7.56□□□□□ -1.2
USP11P51784 MIR551B-201ENST00000384984 96 ntBASIC7.56□□□□□ -1.2
USP11P51784 FCF1P5-201ENST00000406490 482 ntBASIC7.56□□□□□ -1.2
USP11P51784 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.56□□□□□ -1.2
USP11P51784 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.56□□□□□ -1.2
USP11P51784 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.56□□□□□ -1.2
USP11P51784 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.56□□□□□ -1.2
USP11P51784 GTF2IP3-201ENST00000433887 494 ntBASIC7.56□□□□□ -1.2
USP11P51784 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.56□□□□□ -1.2
USP11P51784 GAPDHP33-201ENST00000443168 1013 ntBASIC7.56□□□□□ -1.2
USP11P51784 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.56□□□□□ -1.2
USP11P51784 AL589880.1-201ENST00000448271 287 ntBASIC7.56□□□□□ -1.2
USP11P51784 AL034369.1-201ENST00000453808 477 ntBASIC7.56□□□□□ -1.2
USP11P51784 CEACAMP11-201ENST00000455211 583 ntBASIC7.56□□□□□ -1.2
USP11P51784 RPL7P45-201ENST00000455851 743 ntBASIC7.56□□□□□ -1.2
USP11P51784 SULT1D1P-201ENST00000458020 882 ntBASIC7.56□□□□□ -1.2
USP11P51784 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.56□□□□□ -1.2
USP11P51784 STRADBP1-201ENST00000478954 1281 ntBASIC7.56□□□□□ -1.2
USP11P51784 RN7SL104P-201ENST00000498686 293 ntBASIC7.56□□□□□ -1.2
USP11P51784 AC139713.1-202ENST00000512366 460 ntBASIC7.56□□□□□ -1.2
USP11P51784 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.56□□□□□ -1.2
USP11P51784 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.56□□□□□ -1.2
USP11P51784 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
USP11P51784 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.56□□□□□ -1.2
USP11P51784 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.56□□□□□ -1.2
USP11P51784 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.56□□□□□ -1.2
USP11P51784 AL354943.1-201ENST00000572103 781 ntBASIC7.56□□□□□ -1.2
USP11P51784 DHFRP1-201ENST00000579682 559 ntBASIC7.56□□□□□ -1.2
USP11P51784 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC7.56□□□□□ -1.2
USP11P51784 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.56□□□□□ -1.2
USP11P51784 AC079880.2-201ENST00000603790 1213 ntBASIC7.56□□□□□ -1.2
USP11P51784 AC114477.1-201ENST00000605097 605 ntBASIC7.56□□□□□ -1.2
USP11P51784 AC024060.1-201ENST00000607052 494 ntBASIC7.56□□□□□ -1.2
USP11P51784 AP002345.2-201ENST00000609961 904 ntBASIC7.56□□□□□ -1.2
USP11P51784 AL359314.1-201ENST00000616913 261 ntBASIC7.56□□□□□ -1.2
USP11P51784 AC211486.4-201ENST00000621495 113 ntBASIC7.56□□□□□ -1.2
USP11P51784 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.56□□□□□ -1.2
USP11P51784 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
USP11P51784 OR8A1-204ENST00000642111 1145 ntBASIC7.56□□□□□ -1.2
USP11P51784 MAPK10-270ENST00000641102 3538 ntBASIC7.56□□□□□ -1.2
USP11P51784 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
USP11P51784 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USP11P51784 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USP11P51784 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USP11P51784 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.56□□□□□ -1.2
USP11P51784 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USP11P51784 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.56□□□□□ -1.2
USP11P51784 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USP11P51784 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USP11P51784 AC078880.4-201ENST00000617627 1749 ntBASIC7.55□□□□□ -1.2
USP11P51784 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
USP11P51784 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
USP11P51784 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
USP11P51784 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
USP11P51784 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
USP11P51784 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
USP11P51784 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.55□□□□□ -1.2
USP11P51784 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 AC105402.1-201ENST00000413336 545 ntBASIC7.55□□□□□ -1.2
USP11P51784 AL359092.1-201ENST00000417156 265 ntBASIC7.55□□□□□ -1.2
USP11P51784 AL929472.1-201ENST00000417484 429 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 AC064862.5-201ENST00000440618 334 ntBASIC7.55□□□□□ -1.2
USP11P51784 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.55□□□□□ -1.2
USP11P51784 TVP23CP1-201ENST00000450317 639 ntBASIC7.55□□□□□ -1.2
USP11P51784 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.55□□□□□ -1.2
USP11P51784 AL359385.1-201ENST00000456509 365 ntBASIC7.55□□□□□ -1.2
USP11P51784 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 AC074386.1-206ENST00000487102 761 ntBASIC7.55□□□□□ -1.2
USP11P51784 RPL9P15-201ENST00000491096 532 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 AC095052.1-201ENST00000509955 863 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms