Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC093166.3-201ENST00000448785 303 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 HMGN1P8-201ENST00000463578 288 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 RN7SL741P-201ENST00000482473 289 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 RN7SL649P-201ENST00000496974 275 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 CR383658.1-201ENST00000514609 734 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 HSD3BP3-201ENST00000514706 994 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 RN7SKP35-201ENST00000517210 151 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 AC011853.1-201ENST00000518911 454 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.82□□□□□ -1.48
HNF4AP41235 AC244502.2-201ENST00000543361 851 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.82□□□□□ -1.48
HNF4AP41235 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 MIR4675-201ENST00000577898 77 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.82□□□□□ -1.48
HNF4AP41235 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 FAM27E2-201ENST00000619668 403 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 AC073592.6-201ENST00000624271 415 ntBASIC5.82□□□□□ -1.48
HNF4AP41235 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.82□□□□□ -1.48
HNF4AP41235 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HNF4AP41235 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HNF4AP41235 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HNF4AP41235 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HNF4AP41235 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.81□□□□□ -1.48
HNF4AP41235 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HNF4AP41235 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.81□□□□□ -1.48
HNF4AP41235 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HNF4AP41235 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.81□□□□□ -1.48
HNF4AP41235 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
HNF4AP41235 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HNF4AP41235 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.81□□□□□ -1.48
HNF4AP41235 MRPS21P2-201ENST00000424704 264 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 DSTNP5-201ENST00000427921 523 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 RPSAP65-201ENST00000429660 595 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 AL392003.1-201ENST00000434394 243 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 Z84478.1-201ENST00000438230 1219 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 RPL5P7-201ENST00000444235 813 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AC098847.1-201ENST00000473094 348 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 TRBV5-2-201ENST00000489095 273 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AC122718.2-201ENST00000505325 591 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AC091874.2-201ENST00000505889 720 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AL158068.1-201ENST00000506116 616 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.81□□□□□ -1.48
HNF4AP41235 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.81□□□□□ -1.48
HNF4AP41235 RNU6-319P-201ENST00000516025 108 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HNF4AP41235 AC009879.1-201ENST00000520029 839 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.81□□□□□ -1.48
HNF4AP41235 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 AL845552.1-201ENST00000556820 323 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.81□□□□□ -1.48
HNF4AP41235 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.81□□□□□ -1.48
HNF4AP41235 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.81□□□□□ -1.48
HNF4AP41235 AL135786.2-201ENST00000608422 615 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 Z95327.3-201ENST00000610385 572 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AC008833.1-201ENST00000611633 691 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AC015922.4-201ENST00000612568 690 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.81□□□□□ -1.48
HNF4AP41235 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 AL356317.1-201ENST00000396110 1436 ntBASIC5.81□□□□□ -1.48
HNF4AP41235 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HNF4AP41235 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HNF4AP41235 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
HNF4AP41235 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 TTC39DP-201ENST00000416781 1688 ntBASIC5.8□□□□□ -1.48
HNF4AP41235 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HNF4AP41235 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HNF4AP41235 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms