Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL15A1P39059 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL15A1P39059 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL15A1P39059 AC068769.1-201ENST00000474767 2426 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 AC107980.1-201ENST00000558671 3355 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 FBXL21-201ENST00000297158 1305 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL15A1P39059 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL15A1P39059 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL15A1P39059 RNA5SP30-201ENST00000365552 115 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 MTND3P20-201ENST00000407663 186 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL15A1P39059 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.32□□□□□ -1.24
COL15A1P39059 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.32□□□□□ -1.24
COL15A1P39059 AL450996.1-201ENST00000445574 1202 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
COL15A1P39059 AL450023.1-201ENST00000450868 751 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 LDHBP2-201ENST00000456969 1005 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.32□□□□□ -1.24
COL15A1P39059 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL15A1P39059 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.32□□□□□ -1.24
COL15A1P39059 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.32□□□□□ -1.24
COL15A1P39059 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.32□□□□□ -1.24
COL15A1P39059 AC021146.10-201ENST00000515628 706 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.32□□□□□ -1.24
COL15A1P39059 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.32□□□□□ -1.24
COL15A1P39059 AL121594.2-201ENST00000541658 472 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 HAUS8P1-201ENST00000549005 542 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.32□□□□□ -1.24
COL15A1P39059 AC096996.1-201ENST00000563813 325 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC7.32□□□□□ -1.24
COL15A1P39059 MIR6837-201ENST00000620884 64 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 AC136428.4-201ENST00000634254 1155 ntBASIC7.32□□□□□ -1.24
COL15A1P39059 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL15A1P39059 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.32□□□□□ -1.24
COL15A1P39059 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL15A1P39059 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 IMMTP1-201ENST00000435590 2219 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
COL15A1P39059 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.31□□□□□ -1.24
COL15A1P39059 AC005725.1-201ENST00000577346 2607 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 AL137918.1-201ENST00000624542 1922 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
COL15A1P39059 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
COL15A1P39059 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 CASKP1-201ENST00000412870 582 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 AK3P5-201ENST00000432033 519 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 UBE2V2P1-201ENST00000434717 398 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 AC096775.1-201ENST00000437724 448 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 EEF1B2P5-201ENST00000444820 548 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 OTX2P1-201ENST00000450956 354 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 AC004129.2-201ENST00000457229 287 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 RN7SL329P-201ENST00000467740 299 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.31□□□□□ -1.24
COL15A1P39059 OR4A46P-201ENST00000527255 933 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.31□□□□□ -1.24
COL15A1P39059 AC126615.2-201ENST00000553003 515 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 HSPE1P2-201ENST00000554777 306 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.31□□□□□ -1.24
COL15A1P39059 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.31□□□□□ -1.24
COL15A1P39059 NF1P10-201ENST00000613227 742 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 AC103798.2-201ENST00000624292 632 ntBASIC7.31□□□□□ -1.24
COL15A1P39059 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.31□□□□□ -1.24
COL15A1P39059 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL15A1P39059 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL15A1P39059 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.31□□□□□ -1.24
COL15A1P39059 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
COL15A1P39059 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.3□□□□□ -1.24
COL15A1P39059 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
COL15A1P39059 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.3□□□□□ -1.24
COL15A1P39059 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL15A1P39059 RNA5SP514-201ENST00000363717 111 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.3□□□□□ -1.24
COL15A1P39059 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
COL15A1P39059 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
COL15A1P39059 GAPDHP42-201ENST00000406848 981 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 RN7SKP273-201ENST00000411392 314 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 NENFP1-201ENST00000419476 466 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 AC019205.1-201ENST00000421830 730 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.3□□□□□ -1.24
COL15A1P39059 AC097523.2-201ENST00000435551 652 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 CYCSP12-201ENST00000437729 300 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.3□□□□□ -1.24
COL15A1P39059 AL390879.1-201ENST00000439143 386 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 AC019185.1-201ENST00000442718 389 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 RN7SL172P-201ENST00000460535 303 ntBASIC7.3□□□□□ -1.24
COL15A1P39059 SLC25A51P1-201ENST00000468432 871 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms