Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 AL356981.1-201ENST00000454879 684 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 AC008897.1-201ENST00000494006 347 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 AC024940.3-201ENST00000538551 316 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 BNIP3P1-201ENST00000547295 580 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN4AP35499 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN4AP35499 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN4AP35499 AC008745.1-201ENST00000604064 271 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SCN4AP35499 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN4AP35499 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 EPS15P1-202ENST00000459691 2071 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN4AP35499 CASC19-281ENST00000642118 1554 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.73□□□□□ -1.33
SCN4AP35499 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SCN4AP35499 MIR192-201ENST00000384915 110 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN4AP35499 AL590139.1-201ENST00000416267 400 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 RPL7P56-201ENST00000429441 717 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 AL162739.1-201ENST00000450606 307 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 RPS3AP53-201ENST00000454716 778 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN4AP35499 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.73□□□□□ -1.33
SCN4AP35499 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN4AP35499 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SCN4AP35499 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN4AP35499 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN4AP35499 AC018558.5-201ENST00000565840 952 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.73□□□□□ -1.33
SCN4AP35499 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN4AP35499 AC005084.1-201ENST00000605160 304 ntBASIC6.73□□□□□ -1.33
SCN4AP35499 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN4AP35499 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.73□□□□□ -1.33
SCN4AP35499 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN4AP35499 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
SCN4AP35499 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN4AP35499 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN4AP35499 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN4AP35499 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.72□□□□□ -1.33
SCN4AP35499 Z95114.1-201ENST00000624264 14574 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 RNU1-149P-201ENST00000390870 161 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 RPL23AP18-201ENST00000416139 468 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.72□□□□□ -1.33
SCN4AP35499 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.72□□□□□ -1.33
SCN4AP35499 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 AC096741.1-201ENST00000472250 846 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 AC095055.1-201ENST00000603472 1113 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 TCL6_3.1-201ENST00000619064 137 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.72□□□□□ -1.33
SCN4AP35499 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SCN4AP35499 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN4AP35499 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN4AP35499 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN4AP35499 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SCN4AP35499 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SCN4AP35499 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN4AP35499 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 AC009831.5-201ENST00000624000 3189 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN4AP35499 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN4AP35499 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN4AP35499 AOX3P-204ENST00000491025 2107 ntBASIC6.72□□□□□ -1.33
SCN4AP35499 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SCN4AP35499 AC011493.1-201ENST00000596753 1632 ntBASIC6.71□□□□□ -1.33
SCN4AP35499 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
SCN4AP35499 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.71□□□□□ -1.33
SCN4AP35499 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.71□□□□□ -1.33
SCN4AP35499 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.71□□□□□ -1.33
SCN4AP35499 NPM1P36-201ENST00000415681 835 ntBASIC6.71□□□□□ -1.33
SCN4AP35499 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.71□□□□□ -1.33
SCN4AP35499 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SCN4AP35499 AK3P5-201ENST00000432033 519 ntBASIC6.71□□□□□ -1.33
SCN4AP35499 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms