Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL512637.1-201ENST00000439523 1231 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC005077.1-201ENST00000449226 375 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 AC016027.4-201ENST00000450866 277 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 SBDSP1-204ENST00000453858 737 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC13P31276 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXC13P31276 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC13P31276 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC13P31276 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC13P31276 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC090236.2-201ENST00000587933 1101 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC13P31276 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 AC114876.1-201ENST00000490962 1366 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HOXC13P31276 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC13P31276 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC13P31276 RBPJP7-201ENST00000442803 1447 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 RBPJP5-201ENST00000449433 1447 ntBASIC6.25□□□□□ -1.41
HOXC13P31276 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 AL121768.1-201ENST00000613917 2544 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 AC068769.1-201ENST00000474767 2426 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HOXC13P31276 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 RNA5SP375-201ENST00000362975 119 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 RNU6-249P-201ENST00000363016 102 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 SNORA58B-201ENST00000364259 136 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 RN7SKP286-201ENST00000410894 299 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 RAB9AP4-201ENST00000415230 609 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC13P31276 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 AL731534.1-201ENST00000434711 269 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC13P31276 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC13P31276 AL355032.1-201ENST00000472981 438 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 RPL23AP40-201ENST00000487630 390 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 AC113398.2-201ENST00000507630 558 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC13P31276 SNORD116-30-201ENST00000516468 85 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC13P31276 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC13P31276 TPM3P3-201ENST00000521343 354 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC13P31276 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC13P31276 AC244502.2-201ENST00000543361 851 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC13P31276 AC007494.1-201ENST00000562293 760 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 OR7E18P-201ENST00000592589 702 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC13P31276 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC13P31276 NF1P10-201ENST00000613227 742 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
HOXC13P31276 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC13P31276 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC13P31276 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 AL117378.2-201ENST00000622916 1337 ntBASIC6.24□□□□□ -1.41
HOXC13P31276 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC13P31276 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HOXC13P31276 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXC13P31276 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXC13P31276 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC13P31276 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC13P31276 AL121835.1-201ENST00000404250 354 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms