Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.3□□□□□ -1.56
SHC1P29353 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 MIR1203-201ENST00000408812 85 ntBASIC5.3□□□□□ -1.56
SHC1P29353 MIR1282-201ENST00000408865 101 ntBASIC5.3□□□□□ -1.56
SHC1P29353 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.3□□□□□ -1.56
SHC1P29353 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.3□□□□□ -1.56
SHC1P29353 BX276092.6-201ENST00000430476 250 ntBASIC5.3□□□□□ -1.56
SHC1P29353 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.3□□□□□ -1.56
SHC1P29353 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.3□□□□□ -1.56
SHC1P29353 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.3□□□□□ -1.56
SHC1P29353 RSU1P1-201ENST00000453416 441 ntBASIC5.3□□□□□ -1.56
SHC1P29353 BX276092.8-201ENST00000455722 250 ntBASIC5.3□□□□□ -1.56
SHC1P29353 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 RN7SL57P-201ENST00000493687 290 ntBASIC5.3□□□□□ -1.56
SHC1P29353 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.3□□□□□ -1.56
SHC1P29353 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 MIR2117-201ENST00000516780 80 ntBASIC5.3□□□□□ -1.56
SHC1P29353 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.3□□□□□ -1.56
SHC1P29353 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.3□□□□□ -1.56
SHC1P29353 AL356801.1-201ENST00000559320 294 ntBASIC5.3□□□□□ -1.56
SHC1P29353 AC092121.1-201ENST00000569452 202 ntBASIC5.3□□□□□ -1.56
SHC1P29353 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.3□□□□□ -1.56
SHC1P29353 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.3□□□□□ -1.56
SHC1P29353 AC079776.5-201ENST00000641920 211 ntBASIC5.3□□□□□ -1.56
SHC1P29353 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
SHC1P29353 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.3□□□□□ -1.56
SHC1P29353 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHC1P29353 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHC1P29353 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 GTF2IP4-201ENST00000453092 2054 ntBASIC5.29□□□□□ -1.56
SHC1P29353 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.29□□□□□ -1.56
SHC1P29353 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHC1P29353 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SHC1P29353 U3.23-201ENST00000391132 200 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AC016739.1-201ENST00000405359 345 ntBASIC5.29□□□□□ -1.56
SHC1P29353 RN7SKP29-201ENST00000410957 272 ntBASIC5.29□□□□□ -1.56
SHC1P29353 VN1R3-201ENST00000418822 919 ntBASIC5.29□□□□□ -1.56
SHC1P29353 RFESDP1-201ENST00000422350 461 ntBASIC5.29□□□□□ -1.56
SHC1P29353 IPPKP1-201ENST00000422501 768 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AL354766.1-201ENST00000423396 542 ntBASIC5.29□□□□□ -1.56
SHC1P29353 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.29□□□□□ -1.56
SHC1P29353 AK3P5-201ENST00000432033 519 ntBASIC5.29□□□□□ -1.56
SHC1P29353 RPS10P18-201ENST00000442662 495 ntBASIC5.29□□□□□ -1.56
SHC1P29353 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.29□□□□□ -1.56
SHC1P29353 MTND4LP12-201ENST00000448237 295 ntBASIC5.29□□□□□ -1.56
SHC1P29353 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.29□□□□□ -1.56
SHC1P29353 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 AL122020.1-201ENST00000472287 459 ntBASIC5.29□□□□□ -1.56
SHC1P29353 UBFD1P1-201ENST00000473259 814 ntBASIC5.29□□□□□ -1.56
SHC1P29353 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHC1P29353 AC078899.1-201ENST00000521432 1185 ntBASIC5.29□□□□□ -1.56
SHC1P29353 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.29□□□□□ -1.56
SHC1P29353 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.29□□□□□ -1.56
SHC1P29353 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.29□□□□□ -1.56
SHC1P29353 AC091078.2-201ENST00000557145 559 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.29□□□□□ -1.56
SHC1P29353 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.29□□□□□ -1.56
SHC1P29353 AC027243.2-201ENST00000602530 724 ntBASIC5.29□□□□□ -1.56
SHC1P29353 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.29□□□□□ -1.56
SHC1P29353 AL096712.1-201ENST00000614561 159 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AL355974.3-201ENST00000617383 467 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AP005431.1-201ENST00000618479 319 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AC129778.1-202ENST00000623812 261 ntBASIC5.29□□□□□ -1.56
SHC1P29353 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 210.2 ms