Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 AC108120.2-201ENST00000512973 294 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 MAST4-IT1-201ENST00000514241 658 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 RN7SKP67-201ENST00000515905 235 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 Y_RNA.710-201ENST00000516975 110 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.73□□□□□ -1.49
ABCD3P28288 AC023310.2-201ENST00000553844 547 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.73□□□□□ -1.49
ABCD3P28288 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.73□□□□□ -1.49
ABCD3P28288 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 AC022106.1-201ENST00000612834 766 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AL591926.1-201ENST00000620542 217 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AP006248.3-201ENST00000623580 594 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 AC073488.6-201ENST00000632293 754 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 AC007842.1-201ENST00000597336 2039 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ABCD3P28288 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 AC018717.1-201ENST00000457712 1505 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 EIF3EP1-201ENST00000433978 1316 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCD3P28288 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 RN7SKP237-201ENST00000364663 301 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 RNU6-609P-201ENST00000365459 107 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ABCD3P28288 RNA5SP115-201ENST00000411160 107 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.72□□□□□ -1.49
ABCD3P28288 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC007568.1-201ENST00000422912 471 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCD3P28288 MORF4L1P7-201ENST00000426038 703 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 PSMD10P2-201ENST00000432890 672 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 OR3D1P-201ENST00000438288 955 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 AC023512.1-201ENST00000444513 499 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 GAPDHP23-201ENST00000444823 993 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCD3P28288 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 RPS27AP3-201ENST00000453803 454 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 RN7SL221P-201ENST00000466190 281 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 RN7SL741P-201ENST00000482473 289 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC090958.1-201ENST00000511122 351 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 AL512310.9-201ENST00000553311 948 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC002519.2-203ENST00000567043 837 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 MIR4701-201ENST00000583094 63 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.72□□□□□ -1.49
ABCD3P28288 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.72□□□□□ -1.49
ABCD3P28288 NPIPB1P-202ENST00000588786 828 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms