Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 STX3-208ENST00000641815 3236 ntBASIC6.47□□□□□ -1.37
BDNFP23560 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.47□□□□□ -1.37
BDNFP23560 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.47□□□□□ -1.37
BDNFP23560 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BDNFP23560 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
BDNFP23560 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BDNFP23560 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BDNFP23560 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BDNFP23560 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BDNFP23560 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.46□□□□□ -1.37
BDNFP23560 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BDNFP23560 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.46□□□□□ -1.37
BDNFP23560 AOX3P-204ENST00000491025 2107 ntBASIC6.46□□□□□ -1.37
BDNFP23560 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.46□□□□□ -1.38
BDNFP23560 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
BDNFP23560 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
BDNFP23560 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.46□□□□□ -1.38
BDNFP23560 DHFRP5-201ENST00000406944 564 ntBASIC6.46□□□□□ -1.38
BDNFP23560 RN7SKP161-201ENST00000411110 305 ntBASIC6.46□□□□□ -1.38
BDNFP23560 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.46□□□□□ -1.38
BDNFP23560 AC066692.1-201ENST00000421721 457 ntBASIC6.46□□□□□ -1.38
BDNFP23560 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.46□□□□□ -1.38
BDNFP23560 AL512593.1-201ENST00000444758 779 ntBASIC6.46□□□□□ -1.38
BDNFP23560 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 CST12P-201ENST00000457644 362 ntBASIC6.46□□□□□ -1.38
BDNFP23560 EIF2S2P4-201ENST00000461070 984 ntBASIC6.46□□□□□ -1.38
BDNFP23560 RPL12P24-201ENST00000474907 486 ntBASIC6.46□□□□□ -1.38
BDNFP23560 AC025458.1-201ENST00000506046 166 ntBASIC6.46□□□□□ -1.38
BDNFP23560 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.46□□□□□ -1.38
BDNFP23560 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.46□□□□□ -1.38
BDNFP23560 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.46□□□□□ -1.38
BDNFP23560 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.46□□□□□ -1.38
BDNFP23560 TRIM77BP-201ENST00000524985 1119 ntBASIC6.46□□□□□ -1.38
BDNFP23560 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.46□□□□□ -1.38
BDNFP23560 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.46□□□□□ -1.38
BDNFP23560 AP005119.1-201ENST00000580956 292 ntBASIC6.46□□□□□ -1.38
BDNFP23560 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.46□□□□□ -1.38
BDNFP23560 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.46□□□□□ -1.38
BDNFP23560 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
BDNFP23560 AL365181.4-201ENST00000609800 547 ntBASIC6.46□□□□□ -1.38
BDNFP23560 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
BDNFP23560 AC079753.1-201ENST00000623243 3868 ntBASIC6.46□□□□□ -1.38
BDNFP23560 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BDNFP23560 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BDNFP23560 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
BDNFP23560 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BDNFP23560 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BDNFP23560 AC011504.1-201ENST00000623331 4103 ntBASIC6.46□□□□□ -1.38
BDNFP23560 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.46□□□□□ -1.38
BDNFP23560 AL355834.1-201ENST00000556602 3965 ntBASIC6.46□□□□□ -1.38
BDNFP23560 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.46□□□□□ -1.38
BDNFP23560 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BDNFP23560 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BDNFP23560 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.45□□□□□ -1.38
BDNFP23560 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
BDNFP23560 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.45□□□□□ -1.38
BDNFP23560 AL359091.1-201ENST00000449048 1734 ntBASIC6.45□□□□□ -1.38
BDNFP23560 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
BDNFP23560 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
BDNFP23560 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.45□□□□□ -1.38
BDNFP23560 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
BDNFP23560 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
BDNFP23560 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
BDNFP23560 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
BDNFP23560 RNFT1P3-201ENST00000340898 1052 ntBASIC6.45□□□□□ -1.38
BDNFP23560 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
BDNFP23560 U3.23-201ENST00000391132 200 ntBASIC6.45□□□□□ -1.38
BDNFP23560 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
BDNFP23560 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.45□□□□□ -1.38
BDNFP23560 AC079807.1-201ENST00000429993 481 ntBASIC6.45□□□□□ -1.38
BDNFP23560 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.45□□□□□ -1.38
BDNFP23560 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.45□□□□□ -1.38
BDNFP23560 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.45□□□□□ -1.38
BDNFP23560 NPM1P39-201ENST00000449818 867 ntBASIC6.45□□□□□ -1.38
BDNFP23560 AC144530.1-201ENST00000452862 555 ntBASIC6.45□□□□□ -1.38
BDNFP23560 AC094085.1-201ENST00000468914 584 ntBASIC6.45□□□□□ -1.38
BDNFP23560 RN7SL165P-201ENST00000477476 291 ntBASIC6.45□□□□□ -1.38
BDNFP23560 FTH1P8-201ENST00000498161 514 ntBASIC6.45□□□□□ -1.38
BDNFP23560 PCNAP1-201ENST00000505363 709 ntBASIC6.45□□□□□ -1.38
BDNFP23560 OR5H7P-201ENST00000514084 930 ntBASIC6.45□□□□□ -1.38
BDNFP23560 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.45□□□□□ -1.38
BDNFP23560 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.45□□□□□ -1.38
BDNFP23560 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.45□□□□□ -1.38
BDNFP23560 AC007956.1-201ENST00000555623 542 ntBASIC6.45□□□□□ -1.38
BDNFP23560 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
BDNFP23560 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.45□□□□□ -1.38
BDNFP23560 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.45□□□□□ -1.38
BDNFP23560 AP004372.1-201ENST00000604842 844 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms