Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 RNA5SP110-201ENST00000362638 115 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 RNA5SP156-201ENST00000410250 110 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 NMD3P2-201ENST00000421815 761 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 MTCO2P1-201ENST00000424648 477 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 HMGB3P5-201ENST00000428894 612 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AL645936.1-201ENST00000441979 518 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 RPL5P10-201ENST00000445207 894 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC022730.1-201ENST00000473114 568 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC114324.2-202ENST00000503812 134 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC010468.3-201ENST00000508225 458 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC090958.1-201ENST00000511122 351 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 HMGN1P26-201ENST00000558737 303 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 MTATP6P24-201ENST00000576835 677 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 SMIM12P1-201ENST00000603004 274 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AP001823.1-201ENST00000604056 1003 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC096586.2-201ENST00000610260 441 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 LINC00216-201ENST00000623548 1126 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 THAP12P9-201ENST00000503971 2360 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AC140134.1-201ENST00000511830 3544 ntBASIC5.53□□□□□ -1.52
TNFRSF1BP20333 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TNFRSF1BP20333 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AC110792.3-201ENST00000595906 1614 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 RN7SKP257-201ENST00000364525 309 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 RNU6-316P-201ENST00000391027 107 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 PRELID1P1-201ENST00000403549 660 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AL132875.1-201ENST00000403623 949 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 RN7SKP17-201ENST00000411242 351 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 MYL6P5-201ENST00000412707 459 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 CETN4P-201ENST00000432407 469 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AL022324.2-201ENST00000434827 780 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 RPEP4-201ENST00000437636 602 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AC004854.1-201ENST00000440356 349 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AC245291.3-201ENST00000443400 292 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AL590004.3-202ENST00000445883 451 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AC016027.4-201ENST00000450866 277 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 RPL12P39-201ENST00000455456 496 ntBASIC5.52□□□□□ -1.53
TNFRSF1BP20333 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.52□□□□□ -1.53
TNFRSF1BP20333 RN7SL836P-201ENST00000476140 296 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms