Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NCK1P16333 SNORD125-201ENST00000459538 96 ntBASIC5.36□□□□□ -1.55
NCK1P16333 AC012123.2-201ENST00000485809 248 ntBASIC5.36□□□□□ -1.55
NCK1P16333 AP002453.1-201ENST00000492327 668 ntBASIC5.36□□□□□ -1.55
NCK1P16333 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NCK1P16333 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.36□□□□□ -1.55
NCK1P16333 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.36□□□□□ -1.55
NCK1P16333 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.36□□□□□ -1.55
NCK1P16333 IGLV3-30-201ENST00000524362 298 ntBASIC5.36□□□□□ -1.55
NCK1P16333 OR4A17P-201ENST00000526032 904 ntBASIC5.36□□□□□ -1.55
NCK1P16333 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.36□□□□□ -1.55
NCK1P16333 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.36□□□□□ -1.55
NCK1P16333 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.36□□□□□ -1.55
NCK1P16333 AC091078.2-201ENST00000557145 559 ntBASIC5.36□□□□□ -1.55
NCK1P16333 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.36□□□□□ -1.55
NCK1P16333 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.36□□□□□ -1.55
NCK1P16333 AC004232.2-201ENST00000574245 821 ntBASIC5.36□□□□□ -1.55
NCK1P16333 CCDC58P1-201ENST00000578567 430 ntBASIC5.36□□□□□ -1.55
NCK1P16333 MIR3157-201ENST00000578688 85 ntBASIC5.36□□□□□ -1.55
NCK1P16333 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.36□□□□□ -1.55
NCK1P16333 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.36□□□□□ -1.55
NCK1P16333 AC073488.6-201ENST00000632293 754 ntBASIC5.36□□□□□ -1.55
NCK1P16333 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NCK1P16333 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NCK1P16333 AC008627.1-201ENST00000517511 1704 ntBASIC5.36□□□□□ -1.55
NCK1P16333 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NCK1P16333 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NCK1P16333 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
NCK1P16333 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NCK1P16333 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 AC112255.1-201ENST00000624070 2493 ntBASIC5.35□□□□□ -1.55
NCK1P16333 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NCK1P16333 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 AC002525.1-201ENST00000624392 1622 ntBASIC5.35□□□□□ -1.55
NCK1P16333 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.35□□□□□ -1.55
NCK1P16333 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.35□□□□□ -1.55
NCK1P16333 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.35□□□□□ -1.55
NCK1P16333 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 MTHFD2P5-201ENST00000320415 844 ntBASIC5.35□□□□□ -1.55
NCK1P16333 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
NCK1P16333 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.35□□□□□ -1.55
NCK1P16333 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NCK1P16333 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NCK1P16333 AL096711.1-201ENST00000404780 554 ntBASIC5.35□□□□□ -1.55
NCK1P16333 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.35□□□□□ -1.55
NCK1P16333 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 TMEM183AP1-205ENST00000432739 290 ntBASIC5.35□□□□□ -1.55
NCK1P16333 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.35□□□□□ -1.55
NCK1P16333 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.35□□□□□ -1.55
NCK1P16333 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.35□□□□□ -1.55
NCK1P16333 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 AC093166.4-201ENST00000457867 318 ntBASIC5.35□□□□□ -1.55
NCK1P16333 RN7SL393P-201ENST00000463588 296 ntBASIC5.35□□□□□ -1.55
NCK1P16333 AC018639.1-201ENST00000492994 442 ntBASIC5.35□□□□□ -1.55
NCK1P16333 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.35□□□□□ -1.55
NCK1P16333 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 MAST4-IT1-201ENST00000514241 658 ntBASIC5.35□□□□□ -1.55
NCK1P16333 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.35□□□□□ -1.55
NCK1P16333 SEPT10P1-201ENST00000517342 1162 ntBASIC5.35□□□□□ -1.55
NCK1P16333 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.35□□□□□ -1.55
NCK1P16333 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 AP005119.1-201ENST00000580956 292 ntBASIC5.35□□□□□ -1.55
NCK1P16333 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 AC068768.2-201ENST00000602352 343 ntBASIC5.35□□□□□ -1.55
NCK1P16333 U91328.4-201ENST00000608919 517 ntBASIC5.35□□□□□ -1.55
NCK1P16333 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.35□□□□□ -1.55
NCK1P16333 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NCK1P16333 OR4F13P-202ENST00000560066 2054 ntBASIC5.35□□□□□ -1.55
NCK1P16333 MIPEPP2-201ENST00000422560 1819 ntBASIC5.34□□□□□ -1.55
NCK1P16333 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.34□□□□□ -1.55
NCK1P16333 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NCK1P16333 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NCK1P16333 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCK1P16333 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NCK1P16333 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NCK1P16333 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NCK1P16333 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
NCK1P16333 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NCK1P16333 AL035422.1-201ENST00000414193 397 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms