Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL358178.1-201ENST00000407698 397 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AL356968.2-201ENST00000412769 1257 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.1□□□□□ -1.59
UBCP0CG48 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.1□□□□□ -1.59
UBCP0CG48 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.1□□□□□ -1.59
UBCP0CG48 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC092865.3-201ENST00000425390 1026 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.1□□□□□ -1.59
UBCP0CG48 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC004129.2-201ENST00000457229 287 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AC004890.1-201ENST00000461005 181 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 RPL12P24-201ENST00000474907 486 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AC105384.2-201ENST00000508433 640 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.1□□□□□ -1.59
UBCP0CG48 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
UBCP0CG48 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.1□□□□□ -1.59
UBCP0CG48 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.1□□□□□ -1.59
UBCP0CG48 MT1CP-201ENST00000567054 174 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 MRPS21P8-201ENST00000569196 235 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 MIR4701-201ENST00000583094 63 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC145423.1-201ENST00000605712 336 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AC012676.3-201ENST00000614983 479 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AC007786.3-201ENST00000615154 596 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AC015712.7-201ENST00000615211 635 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 CR382285.2-201ENST00000624662 1495 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.1□□□□□ -1.59
UBCP0CG48 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
UBCP0CG48 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
UBCP0CG48 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBCP0CG48 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 AC003985.2-201ENST00000562268 1669 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 OR9K1P-202ENST00000641111 3217 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
UBCP0CG48 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.09□□□□□ -1.59
UBCP0CG48 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UBCP0CG48 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UBCP0CG48 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.09□□□□□ -1.59
UBCP0CG48 RN7SKP38-201ENST00000410782 309 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 AC023141.8-201ENST00000442554 208 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 BMS1P10-201ENST00000443754 1120 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 GAPDHP14-201ENST00000450472 937 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 PPIAP7-201ENST00000454070 489 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.09□□□□□ -1.59
UBCP0CG48 MAST4-IT1-201ENST00000514241 658 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 PRMT5P1-201ENST00000514351 598 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 AP000620.1-201ENST00000527147 504 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 AC007346.1-201ENST00000569208 867 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 AC073333.2-201ENST00000603589 769 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.09□□□□□ -1.59
UBCP0CG48 AL135999.3-201ENST00000610501 812 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 AL021918.2-201ENST00000613415 194 ntBASIC5.09□□□□□ -1.59
UBCP0CG48 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UBCP0CG48 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
UBCP0CG48 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
UBCP0CG48 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.6
UBCP0CG48 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.08□□□□□ -1.6
UBCP0CG48 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 CASC19-238ENST00000641523 1558 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.08□□□□□ -1.6
UBCP0CG48 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UBCP0CG48 AC117409.1-201ENST00000470499 1310 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
UBCP0CG48 AP004607.3-201ENST00000530354 3915 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 SELENOWP1-201ENST00000322792 252 ntBASIC5.08□□□□□ -1.6
UBCP0CG48 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UBCP0CG48 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms