Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SPTA1P02549 OR11H2-202ENST00000641517 1085 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SPTA1P02549 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SPTA1P02549 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SPTA1P02549 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SPTA1P02549 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SPTA1P02549 EPS15P1-202ENST00000459691 2071 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SPTA1P02549 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.29□□□□□ -1.56
SPTA1P02549 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 RNA5SP339-201ENST00000390987 122 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 TRGV7-201ENST00000427089 353 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.29□□□□□ -1.56
SPTA1P02549 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.29□□□□□ -1.56
SPTA1P02549 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.29□□□□□ -1.56
SPTA1P02549 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.29□□□□□ -1.56
SPTA1P02549 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 SCARNA6.1-201ENST00000516989 238 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SPTA1P02549 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SPTA1P02549 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SPTA1P02549 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.28□□□□□ -1.56
SPTA1P02549 GTF2IP2-201ENST00000424290 697 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 RPL18P10-201ENST00000425606 538 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 LDHBP2-201ENST00000456969 1005 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.28□□□□□ -1.56
SPTA1P02549 MRPS16P1-201ENST00000523462 412 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC126177.5-201ENST00000549599 178 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 GLRXP2-201ENST00000555594 321 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC209154.1-201ENST00000582156 337 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.28□□□□□ -1.56
SPTA1P02549 MIR7703-201ENST00000620784 77 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.28□□□□□ -1.56
SPTA1P02549 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SPTA1P02549 LINC01739-205ENST00000641890 573 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.28□□□□□ -1.56
SPTA1P02549 OFD1P10Y-201ENST00000434110 1433 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 Z95114.1-201ENST00000624264 14574 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SPTA1P02549 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SPTA1P02549 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 OR11H13P-201ENST00000359695 979 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC108075.1-201ENST00000424692 529 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.28□□□□□ -1.56
SPTA1P02549 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 MGAT2P1-201ENST00000449718 797 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.28□□□□□ -1.56
SPTA1P02549 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.28□□□□□ -1.56
SPTA1P02549 AC104164.1-201ENST00000460282 590 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 RPS23P7-201ENST00000466210 444 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SPTA1P02549 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.28□□□□□ -1.56
SPTA1P02549 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 AL118522.2-201ENST00000616045 615 ntBASIC5.28□□□□□ -1.56
SPTA1P02549 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.28□□□□□ -1.56
SPTA1P02549 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SPTA1P02549 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SPTA1P02549 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.27□□□□□ -1.57
SPTA1P02549 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 RNA5SP335-201ENST00000363817 110 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 SNORA70.2-201ENST00000364506 135 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 RPS4XP9-201ENST00000405151 780 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 MRPL53P1-201ENST00000414323 319 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 MORF4L1P5-201ENST00000433352 961 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 BMS1P19-201ENST00000433925 393 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 SDC4P-201ENST00000453285 601 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AC083982.1-201ENST00000485679 344 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AP000889.1-201ENST00000530968 660 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.27□□□□□ -1.57
SPTA1P02549 AL353796.1-201ENST00000561542 3241 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AC015720.2-201ENST00000567709 334 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms