Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK2O43353 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK2O43353 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK2O43353 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK2O43353 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK2O43353 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK2O43353 RNU6-249P-201ENST00000363016 102 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 MIR130A-201ENST00000385274 89 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 U3.23-201ENST00000391132 200 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 MEAF6P1-201ENST00000416092 327 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK2O43353 AC023141.3-201ENST00000436698 278 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.82□□□□□ -1.48
RIPK2O43353 RPS10P18-201ENST00000442662 495 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.82□□□□□ -1.48
RIPK2O43353 ABCC13-202ENST00000463099 3842 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 H3F3AP5-201ENST00000475267 429 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 RN7SL502P-201ENST00000481857 290 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AP002981.1-201ENST00000517692 975 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.82□□□□□ -1.48
RIPK2O43353 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.82□□□□□ -1.48
RIPK2O43353 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK2O43353 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK2O43353 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.82□□□□□ -1.48
RIPK2O43353 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK2O43353 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RIPK2O43353 Z93930.3-201ENST00000607919 749 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AL356608.1-201ENST00000610034 820 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.82□□□□□ -1.48
RIPK2O43353 MIR6070-201ENST00000613967 103 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 MIR6736-201ENST00000616799 59 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 MIR6829-201ENST00000620375 67 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AC211486.4-201ENST00000621495 113 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AC074140.1-201ENST00000621617 208 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AC025262.3-201ENST00000623666 360 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.82□□□□□ -1.48
RIPK2O43353 AC073488.3-201ENST00000631611 778 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 MIPEPP2-201ENST00000422560 1819 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.82□□□□□ -1.48
RIPK2O43353 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RIPK2O43353 AP005435.3-201ENST00000531260 3198 ntBASIC5.82□□□□□ -1.48
RIPK2O43353 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RIPK2O43353 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIPK2O43353 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 RNA5SP279-201ENST00000365513 117 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 SNORA64.3-201ENST00000365647 134 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RIPK2O43353 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 HYALP1-201ENST00000417674 1279 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.81□□□□□ -1.48
RIPK2O43353 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 VN1R20P-201ENST00000425215 966 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.81□□□□□ -1.48
RIPK2O43353 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 GAPDHP19-201ENST00000431768 1005 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 GAPDHP48-201ENST00000436626 961 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 PCBP2P1-201ENST00000437262 977 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 CBX1P2-201ENST00000453841 458 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 RPL36AP55-201ENST00000454114 305 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.81□□□□□ -1.48
RIPK2O43353 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 NPM1P28-201ENST00000492269 840 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.81□□□□□ -1.48
RIPK2O43353 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 MAST4-IT1-201ENST00000514241 658 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 NPIPB14P-203ENST00000532298 987 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 MRPS21P8-201ENST00000569196 235 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 AC073333.2-201ENST00000603589 769 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 AC012368.3-201ENST00000604190 219 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 AC012511.1-201ENST00000608140 449 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 AC073575.2-201ENST00000614212 627 ntBASIC5.81□□□□□ -1.48
RIPK2O43353 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RIPK2O43353 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RIPK2O43353 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
RIPK2O43353 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIPK2O43353 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms