Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL096803.3-201ENST00000609032 532 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 AC097478.2-201ENST00000610572 514 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM38O00635 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TRIM38O00635 AC027575.3-201ENST00000583058 2747 ntBASIC6.26□□□□□ -1.41
TRIM38O00635 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TRIM38O00635 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM38O00635 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 NCOA4P2-201ENST00000340589 1813 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC132825.1-201ENST00000463573 2247 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 MAPK10-261ENST00000641050 3109 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM38O00635 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 SNORA51.9-201ENST00000384295 124 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 LYPLA1P3-201ENST00000402650 695 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 RPS26P38-201ENST00000414476 348 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC112492.2-201ENST00000432774 1030 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 MTCYBP15-201ENST00000433123 1127 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC006326.1-201ENST00000445465 787 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC097463.1-201ENST00000447288 481 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 AL627224.1-201ENST00000448334 444 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM38O00635 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC114728.1-201ENST00000488289 483 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC022206.1-201ENST00000495947 347 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 MIR4420-201ENST00000583944 77 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM38O00635 MIR4760-201ENST00000585040 80 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC008507.3-201ENST00000585753 472 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM38O00635 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC005021.1-201ENST00000608730 355 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC092266.1-201ENST00000610958 165 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 AC097655.1-201ENST00000635075 318 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 OR7E91P-202ENST00000642062 1198 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM38O00635 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM38O00635 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM38O00635 HSPD1P9-201ENST00000420325 1636 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 SAMMSON-210ENST00000641260 1308 ntBASIC6.25□□□□□ -1.41
TRIM38O00635 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM38O00635 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 AL354854.1-201ENST00000455940 1363 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AC009501.3-201ENST00000605001 1352 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM38O00635 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 AC066692.1-201ENST00000421721 457 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM38O00635 AL513321.1-201ENST00000441175 761 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 RPL6P30-201ENST00000443382 862 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AL590004.3-202ENST00000445883 451 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM38O00635 SNX18P26-201ENST00000458433 740 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AC084754.1-201ENST00000463466 464 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 AC128716.1-201ENST00000475129 166 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 LSM3P4-201ENST00000502948 309 ntBASIC6.24□□□□□ -1.41
TRIM38O00635 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms