Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC188H7C350 AC002525.1-201ENST00000624392 1622 ntBASIC5.99□□□□□ -1.45
CCDC188H7C350 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CCDC188H7C350 AP000473.2-201ENST00000602659 1537 ntBASIC5.99□□□□□ -1.45
CCDC188H7C350 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC188H7C350 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AC006206.1-201ENST00000544842 3387 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC188H7C350 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC188H7C350 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 U3.28-201ENST00000391249 210 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 AC016739.1-201ENST00000405359 345 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC188H7C350 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AC096921.1-201ENST00000411661 375 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 AL356968.2-201ENST00000412769 1257 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 TMEM183AP1-205ENST00000432739 290 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 DEFA9P-201ENST00000433042 285 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 PCBP2P1-201ENST00000437262 977 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 OR6C72P-201ENST00000451403 892 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC188H7C350 RBMY2HP-201ENST00000457961 720 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 PSAT1P4-201ENST00000466500 526 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 RN7SL269P-201ENST00000467795 305 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 H3F3AP5-201ENST00000475267 429 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AC122714.1-201ENST00000502510 459 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AC091078.2-201ENST00000557145 559 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 DHFRP1-201ENST00000579682 559 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 MIR7853-201ENST00000584820 132 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AL591222.2-201ENST00000604443 754 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AC073488.3-201ENST00000631611 778 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC188H7C350 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC188H7C350 AL161912.4-201ENST00000623889 2468 ntBASIC5.98□□□□□ -1.45
CCDC188H7C350 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC188H7C350 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 CUL4AP1-201ENST00000514750 1863 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC188H7C350 SNORA64.3-201ENST00000365647 134 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC188H7C350 U3.23-201ENST00000391132 200 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC005042.1-201ENST00000393397 800 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC096644.3-201ENST00000416788 338 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 VN1R20P-201ENST00000425215 966 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC234771.2-201ENST00000445718 597 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC188H7C350 RPS23P2-201ENST00000463671 415 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC188H7C350 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 NPIPB14P-203ENST00000532298 987 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC188H7C350 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 MIR3157-201ENST00000578688 85 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 AC009303.3-201ENST00000591103 736 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 AC138473.1-201ENST00000605717 526 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 AC073389.3-201ENST00000609434 935 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 AC010632.3-201ENST00000611377 369 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 OR11H2-202ENST00000641517 1085 ntBASIC5.97□□□□□ -1.45
CCDC188H7C350 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC188H7C350 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms