Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RBPJP6-201ENST00000411556 1431 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 CST13P-201ENST00000376992 428 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 RNU1-136P-201ENST00000384181 164 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 HNRNPCP2-201ENST00000399515 881 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 RN7SKP281-201ENST00000410472 352 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 PTP4A1P1-201ENST00000420539 515 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 OR5M12P-201ENST00000423388 929 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC092421.1-201ENST00000448148 418 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL121877.1-201ENST00000453704 622 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 CYCSP34-201ENST00000458172 304 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 GAPDHP53-201ENST00000458397 924 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 STMN1P2-201ENST00000508435 439 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AF186996.3-201ENST00000509527 964 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC093664.1-201ENST00000511779 289 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 HSD3BP3-201ENST00000514706 994 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 SCARNA5-201ENST00000516201 276 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 OR4A42P-201ENST00000531397 938 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009248.1-201ENST00000548155 735 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 GLRXP2-201ENST00000555594 321 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC010650.1-201ENST00000567559 494 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 OR1F2P-201ENST00000570470 933 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 MIR3689F-201ENST00000579617 66 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC005703.4-201ENST00000580422 538 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 RNU4ATAC-201ENST00000580972 127 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 COX6CP16-201ENST00000603667 216 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 OR13Z2P-201ENST00000606338 555 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC097505.1-201ENST00000610199 565 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 MIR6872-201ENST00000612981 62 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 RN7SL261P-201ENST00000613441 282 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC067931.1-201ENST00000624190 671 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 TEX41-255ENST00000626404 610 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 BMS1P21-201ENST00000634565 365 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC243725.1-201ENST00000637164 436 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AC063923.1-201ENST00000478982 1619 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL021368.2-201ENST00000606125 5352 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CHKB-CPT1BH3BT56 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CHKB-CPT1BH3BT56 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CHKB-CPT1BH3BT56 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CHKB-CPT1BH3BT56 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.93
CHKB-CPT1BH3BT56 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 AC092111.2-201ENST00000611627 1414 ntBASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 LRRC37A15P-201ENST00000514785 1355 ntBASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 EEF1A1P33-201ENST00000554413 1362 ntBASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 AC245100.2-201ENST00000454544 1679 ntBASIC3.02□□□□□ -1.93
CHKB-CPT1BH3BT56 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms