Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 RPSAP37-201ENST00000470913 821 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 LSM3P4-201ENST00000502948 309 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC114781.3-201ENST00000512083 142 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC021678.3-201ENST00000517893 476 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC122688.1-201ENST00000541494 223 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 RNA5SP439-201ENST00000617595 124 ntBASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRAV27A0A087WT01 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 RNU1-65P-201ENST00000363919 148 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AL359265.1-201ENST00000440296 795 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC068491.1-201ENST00000449539 1241 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 NXT1P1-201ENST00000458481 316 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AL117692.1-201ENST00000494283 713 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 RN7SKP253-201ENST00000516424 309 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 IGLV3-24-201ENST00000517477 197 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC027369.2-201ENST00000528030 440 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC006512.2-201ENST00000543250 486 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 HSPE1P2-201ENST00000554777 306 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 LINC00556-201ENST00000569603 412 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 RPL12P48-201ENST00000605620 304 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC097641.3-201ENST00000613523 464 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC048341.3-201ENST00000619323 491 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AC073592.6-201ENST00000624271 415 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 AL034546.1-201ENST00000623740 3693 ntBASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRAV27A0A087WT01 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRAV27A0A087WT01 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRAV27A0A087WT01 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRAV27A0A087WT01 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRAV27A0A087WT01 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRAV27A0A087WT01 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRAV27A0A087WT01 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AK4P4-201ENST00000419465 646 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AL354766.1-201ENST00000423396 542 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 KATNBL1P2-201ENST00000433311 835 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 NPM1P18-201ENST00000434232 732 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 LDHAP2-201ENST00000437325 985 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 NANOGP9-201ENST00000439890 892 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms