Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC106785.3-201ENST00000564064 847 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 CD24P2-201ENST00000565486 219 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC008521.2-201ENST00000591021 259 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 BNIP3P38-201ENST00000601117 544 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC112220.2-201ENST00000605513 533 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC140725.3-201ENST00000616193 880 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC026124.2-201ENST00000621847 656 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 SNX18P12-201ENST00000624821 759 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 Z95114.1-201ENST00000624264 14574 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AL035405.1-201ENST00000400795 710 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AL607077.1-201ENST00000401718 499 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 RPL35AP31-201ENST00000418340 337 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 RPS29P14-201ENST00000431518 171 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 FABP5P2-201ENST00000439042 408 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC108751.3-201ENST00000461814 1020 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC026254.2-201ENST00000475295 371 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC023818.1-201ENST00000498379 384 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC104109.1-201ENST00000498563 436 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC117525.1-201ENST00000515228 503 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 RN7SKP253-201ENST00000516424 309 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 RNA5SP340-201ENST00000517132 107 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 RNA5SP400-201ENST00000517155 111 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 IGLVIV-64-201ENST00000518581 301 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 SUMO2P19-201ENST00000518920 295 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AP001858.2-201ENST00000536213 601 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 RPA2P1-201ENST00000556557 721 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC027216.1-201ENST00000577726 685 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC233702.7-202ENST00000582941 211 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC133794.1-201ENST00000602731 914 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AL513218.1-201ENST00000606527 391 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC108865.2-201ENST00000606881 432 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC136428.4-201ENST00000634254 1155 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AP000547.3-204ENST00000588548 2523 ntBASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CTDP1Q9Y5B0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 CASC19-261ENST00000641853 1638 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AC009779.8-201ENST00000641684 4384 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 SNORA63.3-201ENST00000362682 132 ntBASIC7.16□□□□□ -1.26
CTDP1Q9Y5B0 AL445238.1-204ENST00000400311 463 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms