Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RPS3AP9-201ENST00000417027 792 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 USP9YP27-201ENST00000418455 438 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 CDC42P6-201ENST00000421246 576 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC069157.1-201ENST00000421749 137 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AL672212.1-201ENST00000422246 400 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC005040.1-201ENST00000437783 482 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC002542.1-201ENST00000440683 193 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC079776.3-201ENST00000450665 370 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 RN7SL350P-201ENST00000492591 299 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 RN7SKP2-201ENST00000517003 319 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AP001803.1-201ENST00000525668 147 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC024405.1-201ENST00000532521 1042 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AL355836.1-201ENST00000555951 870 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AP001429.1-201ENST00000602568 530 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC023158.2-201ENST00000614876 543 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 Six3os1_2.1-201ENST00000616963 217 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC069209.1-201ENST00000619282 651 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC005753.1-201ENST00000623837 618 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 GPI-202ENST00000415930 4000 ntTSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 MAPK10-354ENST00000641823 2732 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
PHF8Q9UPP1 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC10.15□□□□□ -0.79
PHF8Q9UPP1 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
PHF8Q9UPP1 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PHF8Q9UPP1 HSPD1P7-201ENST00000447985 1686 ntBASIC10.15□□□□□ -0.79
PHF8Q9UPP1 RARSP1-201ENST00000542842 1418 ntBASIC10.15□□□□□ -0.79
PHF8Q9UPP1 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PHF8Q9UPP1 AC007342.7-201ENST00000624610 2337 ntBASIC10.15□□□□□ -0.79
PHF8Q9UPP1 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 MAPK10-343ENST00000641677 2546 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 EEF1A1P9-201ENST00000514975 1383 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 MAPK10-285ENST00000641207 2746 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 MIR606-201ENST00000384851 96 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 FDPSP1-201ENST00000424976 1071 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AL035410.1-201ENST00000427409 427 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AL365184.2-201ENST00000431139 435 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC092757.1-201ENST00000467293 467 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 LARP1BP2-201ENST00000486594 519 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 SUMO2P17-201ENST00000504438 285 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC112225.1-201ENST00000508230 297 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 RNA5SP518-201ENST00000515957 119 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 MTND1P35-201ENST00000526739 508 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC073091.2-201ENST00000603205 907 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC069304.2-201ENST00000605154 435 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC026108.1-201ENST00000635444 547 ntBASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PHF8Q9UPP1 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PHF8Q9UPP1 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms