Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 AC008739.5-201ENST00000623035 1938 ntBASIC8.29□□□□□ -1.08
LHX6Q9UPM6 BTN2A3P-201ENST00000377662 1836 ntBASIC8.29□□□□□ -1.08
LHX6Q9UPM6 AC119674.1-204ENST00000641348 1343 ntBASIC8.29□□□□□ -1.08
LHX6Q9UPM6 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.29□□□□□ -1.08
LHX6Q9UPM6 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 TRIM60P19-201ENST00000452879 1462 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ZNF587P1-201ENST00000415378 1386 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 RNU6-266P-201ENST00000364225 107 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.512-201ENST00000384518 102 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 CTSLP8-201ENST00000413075 967 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 RPA2P2-201ENST00000419698 796 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 HMGB1P9-201ENST00000429856 646 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 SETP5-201ENST00000437270 562 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC093799.1-201ENST00000452411 499 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 VN1R6P-201ENST00000458417 907 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 SLC25A51P1-201ENST00000468432 871 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 RN7SKP24-201ENST00000515888 284 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 RNU6-150P-201ENST00000516237 95 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 HNRNPCP8-201ENST00000528764 888 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC089998.3-201ENST00000549715 493 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AL162632.2-201ENST00000553933 399 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC011468.4-201ENST00000603942 409 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC007216.5-201ENST00000612457 109 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC138932.4-201ENST00000619102 109 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC138969.4-201ENST00000620593 109 ntBASIC8.28□□□□□ -1.08
LHX6Q9UPM6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LHX6Q9UPM6 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 PDZPH1P-201ENST00000412514 1783 ntBASIC8.27□□□□□ -1.08
LHX6Q9UPM6 AC091962.1-201ENST00000561496 1765 ntBASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
LHX6Q9UPM6 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
LHX6Q9UPM6 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms