Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AL132857.1-201ENST00000555180 708 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 NIFKP6-201ENST00000598115 845 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AC011500.1-201ENST00000601963 469 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 MTCO3P22-201ENST00000603219 784 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 SNORD96A-201ENST00000606577 79 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 AC097641.3-201ENST00000613523 464 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 MIR6849-201ENST00000618543 69 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 SAGE3P-201ENST00000619800 1635 ntBASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.95□□□□□ -1.46
AMBRA1Q9C0C7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 MAPK10-287ENST00000641217 3037 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RNU1-5P-201ENST00000362684 144 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RNA5SP514-201ENST00000363717 111 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RN7SKP250-201ENST00000363924 321 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RNY3P9-201ENST00000384727 106 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 FDPSP5-201ENST00000399474 1057 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 HMGB3P19-201ENST00000403971 560 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AL158827.1-201ENST00000416300 391 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 XKRYP1-201ENST00000423438 492 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC092651.1-201ENST00000426110 312 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 XKRYP2-201ENST00000432915 492 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC007563.3-201ENST00000433233 371 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 NANOGP9-201ENST00000439890 892 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC092967.1-201ENST00000449016 481 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 CCNJP1-201ENST00000450600 1149 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC118758.1-202ENST00000454719 225 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 SNORD11.1-201ENST00000459482 85 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RN7SL83P-201ENST00000468131 297 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC008410.1-201ENST00000483777 339 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RPL19P11-201ENST00000495944 589 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 OR5H3P-201ENST00000502817 919 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 IGKV1D-22-201ENST00000518953 324 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC090651.1-201ENST00000567865 634 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 NDUFA5P11-201ENST00000567995 343 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC022022.2-201ENST00000602989 360 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC079880.2-201ENST00000603790 1213 ntBASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms