Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 NXT1P1-201ENST00000458481 316 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 PSAT1P4-201ENST00000466500 526 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 ATP5LP5-201ENST00000483050 299 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 RPL29P23-201ENST00000486188 442 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 RPSAP51-201ENST00000497462 645 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 WBP1LP3-201ENST00000523033 208 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC122688.1-201ENST00000541494 223 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 RPA2P1-201ENST00000556557 721 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC002519.2-203ENST00000567043 837 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 MIR4260-201ENST00000583107 67 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC245014.3-201ENST00000618589 347 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC42Q96M95 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC42Q96M95 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC42Q96M95 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC42Q96M95 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC42Q96M95 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC015689.2-201ENST00000528172 1738 ntBASIC6.11□□□□□ -1.43
CCDC42Q96M95 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 GPS2P1-201ENST00000411761 986 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 Z82198.3-201ENST00000421145 199 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC009784.1-201ENST00000426484 460 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 PCBP2P1-201ENST00000437262 977 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 CYCSP51-201ENST00000443545 318 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 RBMY2AP-201ENST00000445405 1157 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 RBMY2CP-201ENST00000448575 1157 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 RBMY2DP-202ENST00000448881 1157 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 RBMY2BP-202ENST00000451071 1156 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC093166.4-201ENST00000457867 318 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 RN7SL57P-201ENST00000493687 290 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 NPM1P21-201ENST00000513394 762 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC027216.1-201ENST00000577726 685 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC090236.2-201ENST00000587933 1101 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC090607.5-201ENST00000615692 224 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 AL162574.1-201ENST00000615702 950 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 AC090220.1-201ENST00000593078 1699 ntBASIC6.1□□□□□ -1.43
CCDC42Q96M95 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CCDC42Q96M95 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC42Q96M95 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC42Q96M95 AC027088.4-201ENST00000611559 1947 ntBASIC6.09□□□□□ -1.43
CCDC42Q96M95 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC42Q96M95 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC42Q96M95 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC42Q96M95 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
CCDC42Q96M95 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC42Q96M95 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC42Q96M95 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC42Q96M95 MIR191-201ENST00000384873 92 ntBASIC6.09□□□□□ -1.43
CCDC42Q96M95 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC42Q96M95 RBBP4P5-201ENST00000398583 1266 ntBASIC6.09□□□□□ -1.43
CCDC42Q96M95 GCNT1P4-201ENST00000404096 329 ntBASIC6.09□□□□□ -1.43
CCDC42Q96M95 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.09□□□□□ -1.43
CCDC42Q96M95 RPS19P6-201ENST00000441327 433 ntBASIC6.09□□□□□ -1.43
CCDC42Q96M95 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CCDC42Q96M95 CFL1P4-201ENST00000451536 498 ntBASIC6.09□□□□□ -1.43
CCDC42Q96M95 RN7SL570P-201ENST00000484405 292 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms