Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-1170P-201ENST00000515974 106 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC087808.1-201ENST00000520501 361 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 LSM3P5-201ENST00000566307 306 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 RN7SL154P-201ENST00000578043 324 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 RN7SL426P-201ENST00000579106 295 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AL162413.1-201ENST00000603198 110 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC005538.2-201ENST00000623215 1864 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 VN2R3P-201ENST00000422626 1412 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 Y_RNA.579-201ENST00000390939 94 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL121977.1-201ENST00000401636 979 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 RN7SKP140-201ENST00000411196 284 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC079807.1-201ENST00000429993 481 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC098828.1-201ENST00000436164 440 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL831737.1-201ENST00000441288 271 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL731563.1-201ENST00000442202 214 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 FO393419.1-201ENST00000443746 355 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 RN7SL37P-201ENST00000490461 307 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC112203.1-201ENST00000506315 1020 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 BRD9P1-201ENST00000529855 560 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC089998.3-201ENST00000549715 493 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC089984.3-201ENST00000552838 363 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 UBE2CP4-201ENST00000561405 535 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC245014.2-201ENST00000603689 287 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AC246785.4-201ENST00000605374 287 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 RNU6-88P-201ENST00000606801 100 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL359091.2-201ENST00000609303 556 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL137000.1-201ENST00000610528 1244 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 uc_338.5-201ENST00000611839 155 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 AL590396.3-201ENST00000636334 300 ntBASIC8.54□□□□□ -1.04
LRCH3Q96II8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 CREM-203ENST00000344351 1625 ntTSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LRCH3Q96II8 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LRCH3Q96II8 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms