Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RN7SL66P-201ENST00000582099 264 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 MIMT1-201ENST00000597105 1050 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC013244.3-201ENST00000605614 388 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC004908.3-201ENST00000610248 625 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 RFPL4AP6-201ENST00000616792 846 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 SNX18P12-201ENST00000624821 759 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC087516.1-201ENST00000561236 2428 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC011933.2-201ENST00000578539 2790 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ATG4AQ8WYN0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
ATG4AQ8WYN0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
ATG4AQ8WYN0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ATG4AQ8WYN0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.21□□□□□ -1.41
ATG4AQ8WYN0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 RNU6-1000P-201ENST00000391066 106 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 RNA5SP156-201ENST00000410250 110 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 OR13Z1P-201ENST00000416141 834 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC092570.3-201ENST00000420113 693 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 ZNF965P-201ENST00000432501 817 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 SUMO2P8-201ENST00000434672 286 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AL513321.1-201ENST00000441175 761 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 XKRY2-201ENST00000442362 1093 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 RN7SL393P-201ENST00000463588 296 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 H3F3AP5-201ENST00000475267 429 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 RPS4XP17-201ENST00000479057 754 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 ST13P12-201ENST00000508958 1094 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 SNX18P25-201ENST00000510539 758 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 ZNF519P4-201ENST00000514008 125 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 OR4V1P-201ENST00000525394 1140 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AP003080.1-202ENST00000526526 915 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC036111.2-201ENST00000533247 901 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 MTND1P24-201ENST00000552175 861 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AP001496.3-201ENST00000580230 913 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AP001357.1-201ENST00000586304 1053 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 SMIM12P1-201ENST00000603004 274 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 MIR6823-201ENST00000622118 61 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC004808.1-201ENST00000627671 721 ntBASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.21□□□□□ -1.42
ATG4AQ8WYN0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC130304.1-201ENST00000622942 2385 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 RNU6-650P-201ENST00000365658 111 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 MIR421-201ENST00000365696 85 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 RN7SKP108-201ENST00000411367 328 ntBASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.2□□□□□ -1.42
ATG4AQ8WYN0 MTCO2P1-201ENST00000424648 477 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms