Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RN7SL284P-201ENST00000498823 275 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 ARGFXP2-201ENST00000579304 949 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC111152.1-202ENST00000635848 339 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC114774.1-201ENST00000507410 1770 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 AP005435.3-201ENST00000531260 3198 ntBASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.56□□□□□ -1.52
CLHC1Q8NHS4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 MIR133A2-201ENST00000347538 102 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AL354893.1-201ENST00000433735 348 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC015983.1-201ENST00000441577 373 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC073476.1-201ENST00000452854 407 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC093166.4-201ENST00000457867 318 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 RNU7-157P-201ENST00000459600 66 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AL121594.2-201ENST00000541658 472 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC092332.1-201ENST00000563684 829 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 MIR4502-201ENST00000580432 81 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC025857.2-201ENST00000602711 238 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AL353729.2-201ENST00000605859 1249 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 AC022400.9-201ENST00000623633 273 ntBASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLHC1Q8NHS4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC087752.1-201ENST00000391360 558 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 PDCL3P4-201ENST00000489621 720 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 RN7SL612P-201ENST00000497704 295 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC105384.2-201ENST00000508433 640 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 SNORA70.11-201ENST00000515987 138 ntBASIC5.54□□□□□ -1.52
CLHC1Q8NHS4 SNORA70.13-201ENST00000516116 138 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms