Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 RNA5SP453-201ENST00000362503 119 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC016739.1-201ENST00000405359 345 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 RN7SKP279-201ENST00000411383 298 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 RPS14P4-201ENST00000415880 418 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AL354766.1-201ENST00000423396 542 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 EEF1B2P3-201ENST00000447718 678 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC068491.1-201ENST00000449539 1241 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC004129.2-201ENST00000457229 287 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC009963.3-201ENST00000458090 486 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC104339.1-201ENST00000465478 348 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AL157777.1-201ENST00000468100 304 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC006539.1-201ENST00000481419 501 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 ST13P12-201ENST00000508958 1094 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 RPA2P1-201ENST00000556557 721 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AL845552.1-201ENST00000556820 323 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 MIR6889-201ENST00000613185 59 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 MIR6806-201ENST00000622141 64 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC069542.2-201ENST00000624816 216 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC006484.1-201ENST00000435086 1884 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 AC109446.4-201ENST00000623235 2755 ntBASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZNF439Q8NDP4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 RNFT1P3-201ENST00000340898 1052 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 RN7SKP78-201ENST00000364711 318 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 VTI1BP4-201ENST00000427516 527 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 FTLP19-201ENST00000433300 394 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC015983.1-201ENST00000441577 373 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 PPIAP27-201ENST00000453800 265 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 YRDCP3-201ENST00000456507 480 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC005165.2-201ENST00000466070 380 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC098847.1-201ENST00000473094 348 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC084121.1-201ENST00000533882 835 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC091078.2-201ENST00000557145 559 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC090236.2-201ENST00000587933 1101 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC091167.5-201ENST00000605689 894 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC108673.3-201ENST00000609183 335 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AL139099.4-201ENST00000614802 114 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC245014.3-201ENST00000618589 347 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC048341.3-201ENST00000619323 491 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AL591926.1-201ENST00000620542 217 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AL683826.1-201ENST00000624104 627 ntBASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF439Q8NDP4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms