Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf40Q8IXQ3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC093671.1-201ENST00000624981 2929 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC099654.3-201ENST00000447087 1546 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AL159987.1-201ENST00000347911 293 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AL031985.1-201ENST00000392713 418 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 HMGB1P20-201ENST00000402555 677 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AL355994.1-201ENST00000424379 260 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 HMGB3P24-201ENST00000433260 622 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 SUMO2P3-201ENST00000438311 288 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 FRG2FP-204ENST00000453982 852 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 UGT2A3P7-201ENST00000510485 734 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 DPPA2P4-201ENST00000563717 878 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC096996.1-201ENST00000563813 325 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AP001496.3-201ENST00000580230 913 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 SETP3-201ENST00000581726 813 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 AC087565.3-203ENST00000641018 837 ntBASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf40Q8IXQ3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
C9orf40Q8IXQ3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.34□□□□□ -1.56
C9orf40Q8IXQ3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
C9orf40Q8IXQ3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.34□□□□□ -1.56
C9orf40Q8IXQ3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.34□□□□□ -1.56
C9orf40Q8IXQ3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 RNF19BPY-201ENST00000458209 1550 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC007842.1-201ENST00000597336 2039 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 RNA5SP394-201ENST00000364216 119 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 MIR130A-201ENST00000385274 89 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 NPM1P37-201ENST00000403105 874 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 NIFKP3-201ENST00000417799 865 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC093155.2-201ENST00000420734 937 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC092651.1-201ENST00000426110 312 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 BX119321.1-201ENST00000428912 797 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AL022331.1-201ENST00000429025 477 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 OR7E116P-201ENST00000448529 957 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 RSU1P1-201ENST00000453416 441 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 RNU6-964P-201ENST00000516524 69 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC021678.3-201ENST00000517893 476 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC022616.2-201ENST00000523185 300 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 NPM1P5-201ENST00000557228 838 ntBASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.33□□□□□ -1.56
C9orf40Q8IXQ3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms