Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL353807.3-201ENST00000500626 2505 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 Y_RNA.62-201ENST00000362840 99 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 RNU4-81P-201ENST00000363561 144 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL035419.1-201ENST00000397037 564 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 RPS15AP38-201ENST00000413110 372 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL121878.1-201ENST00000418638 859 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC016691.1-201ENST00000441321 413 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL022237.1-201ENST00000446663 358 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 BUD31P2-201ENST00000449374 300 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC005517.1-201ENST00000452091 489 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC130509.1-201ENST00000464158 433 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 PGBD4P1-201ENST00000473644 407 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 RPL10P7-201ENST00000495649 625 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 OR5AZ1P-201ENST00000527448 943 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 PHBP2-201ENST00000532859 806 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 COX4I1P1-201ENST00000554239 509 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC105429.2-201ENST00000610567 517 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC069499.2-201ENST00000610665 382 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC016582.1-202ENST00000636341 2982 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 MIR3662-201ENST00000637030 95 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AP001527.1-201ENST00000566440 1957 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC138207.6-201ENST00000579164 1967 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AC016831.3-201ENST00000446451 1723 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 FTO-222ENST00000637969 2889 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL136298.2-201ENST00000556497 1570 ntBASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS3Q8IXF0 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 AC087392.3-202ENST00000358446 1754 ntBASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS3Q8IXF0 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms