Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNORD116-5-201ENST00000384462 95 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 MCTS2P-201ENST00000394552 546 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL136310.1-201ENST00000404926 654 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL138880.1-201ENST00000405824 642 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 RN7SKP146-201ENST00000410242 334 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 RNU2-17P-201ENST00000410290 190 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 BTF3L4P1-201ENST00000413813 468 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 XKRYP4-201ENST00000414395 483 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 NAP1L4P2-201ENST00000425958 899 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL008629.1-201ENST00000438615 184 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 EEF1A1P39-201ENST00000440791 250 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 CRYGGP-201ENST00000443337 145 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC092601.1-201ENST00000444526 383 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC068135.1-201ENST00000446164 246 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 XKRYP5-201ENST00000449659 483 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 RPL26P30-201ENST00000453533 435 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 PGBD4P1-201ENST00000473644 407 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 RPL9P15-201ENST00000491096 532 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC026414.1-201ENST00000504046 698 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC092349.1-201ENST00000504903 310 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 NACAP5-201ENST00000509863 636 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC138517.1-201ENST00000515724 568 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 NDUFS5P6-201ENST00000529136 295 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 OR8I1P-201ENST00000529291 931 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC005519.1-201ENST00000554490 601 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 RBM22P1-201ENST00000578589 1214 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC012254.4-201ENST00000588843 273 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC091133.5-201ENST00000603088 301 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 HIRAP1-201ENST00000605318 787 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 HULC.1-201ENST00000612720 240 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC010333.3-201ENST00000615100 402 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 TATDN2P3-201ENST00000452855 3665 ntBASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM48Q8IWZ4 AC217777.1-201ENST00000570034 1471 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC007012.2-201ENST00000623206 1676 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 Z97989.1-201ENST00000531702 2421 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 RNA5SP140-201ENST00000364524 92 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 SNORD116-4-201ENST00000384733 96 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 LYPLA1P3-201ENST00000402650 695 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 RN7SKP296-201ENST00000411185 341 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC092638.1-201ENST00000411966 1275 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 RANP6-201ENST00000413691 644 ntBASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM48Q8IWZ4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms