Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 OR9K1P-202ENST00000641111 3217 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 PSG10P-201ENST00000501199 1500 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 RN7SKP250-201ENST00000363924 321 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC121334.1-201ENST00000396414 802 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 GCNT1P4-201ENST00000404096 329 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 FAM183DP-201ENST00000421987 399 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC098847.1-201ENST00000473094 348 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 RN7SL612P-201ENST00000497704 295 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AL121594.2-201ENST00000541658 472 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 ARGFXP2-201ENST00000579304 949 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC011500.1-201ENST00000601963 469 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 AC004801.6-201ENST00000616571 978 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 MFSD8-219ENST00000641228 2559 ntBASIC6.11□□□□□ -1.43
CCDC50Q8IVM0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC092376.2-201ENST00000622621 4116 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 SELENOWP1-201ENST00000322792 252 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 RNA5SP232-201ENST00000364144 119 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 THEM7P-201ENST00000419556 672 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 BMS1P10-201ENST00000443754 1120 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC092106.1-201ENST00000444291 373 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 OR52I1-201ENST00000450052 1050 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 NPM1P19-201ENST00000450070 712 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC004129.2-201ENST00000457229 287 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC092865.4-201ENST00000477936 615 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AL158068.1-201ENST00000506116 616 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AP003033.2-201ENST00000528901 805 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 OR4A41P-201ENST00000533053 928 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC138207.8-204ENST00000579588 527 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC068768.2-201ENST00000602352 343 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC092944.2-201ENST00000605443 889 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 FAM72A-208ENST00000607379 1139 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC008833.1-201ENST00000611633 691 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC007786.3-201ENST00000615154 596 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 uc_338.31-201ENST00000615595 186 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AL078595.2-201ENST00000605309 1780 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 MRRFP1-201ENST00000435941 1675 ntBASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC50Q8IVM0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
CCDC50Q8IVM0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms