Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 BLZF2P-201ENST00000553776 1130 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AL590392.1-201ENST00000604960 446 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 MIR199B-201ENST00000384849 110 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC234781.3-201ENST00000452540 973 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AP002981.1-201ENST00000517692 975 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC008033.2-201ENST00000542626 177 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC092653.1-201ENST00000608509 531 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AL390318.1-201ENST00000624564 687 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC114947.2-201ENST00000565748 2125 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RIF1Q5UIP0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.59□□□□□ -1.52
RIF1Q5UIP0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RIF1Q5UIP0 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC5.59□□□□□ -1.52
RIF1Q5UIP0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 RN7SKP28-201ENST00000364770 305 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AL591848.1-201ENST00000413092 322 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC004690.1-201ENST00000418216 328 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 FAM96AP1-201ENST00000430879 482 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC012653.2-201ENST00000621880 420 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AP002505.2-201ENST00000623585 696 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 BMS1P19-201ENST00000433925 393 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 RPL7AP28-201ENST00000464513 571 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 RPL32P33-201ENST00000487023 394 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 PTTG3P-201ENST00000521862 606 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 OR56A7P-201ENST00000524865 941 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 NBPF8-201ENST00000583271 5330 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AL021877.2-201ENST00000624442 10684 ntBASIC5.58□□□□□ -1.52
RIF1Q5UIP0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIF1Q5UIP0 AC007938.2-201ENST00000604666 2634 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 MIR1204-201ENST00000408388 67 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AC021678.3-201ENST00000517893 476 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 AC011840.5-201ENST00000582125 771 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 EIF3FP1-201ENST00000613970 806 ntBASIC5.57□□□□□ -1.52
RIF1Q5UIP0 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.57□□□□□ -1.52
RIF1Q5UIP0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms