Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-1042P-201ENST00000384204 107 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 UBBP1-201ENST00000392399 473 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AL512329.1-201ENST00000404600 1592 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 RPL12P23-201ENST00000405880 490 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AF121897.1-201ENST00000411867 3980 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC009480.2-201ENST00000422916 432 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC234771.3-201ENST00000454984 622 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC026348.1-201ENST00000462549 1053 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC012175.1-201ENST00000603755 531 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC017002.4-201ENST00000604721 1525 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AL096816.1-201ENST00000623300 2920 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 SNORA75-201ENST00000384158 137 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC092642.1-201ENST00000392417 425 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AL158825.1-201ENST00000414735 521 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.83□□□□□ -1
RC3H1Q5TC82 TCEA1P4-201ENST00000415066 844 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AL389925.1-201ENST00000432257 728 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.83□□□□□ -1
RC3H1Q5TC82 ANKRD30BP3-201ENST00000444850 1070 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AL390728.3-201ENST00000452704 270 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 RPS27P20-201ENST00000492051 246 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.83□□□□□ -1
RC3H1Q5TC82 FAM92A1P2-202ENST00000504766 877 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AC018797.1-201ENST00000510791 255 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC006499.4-201ENST00000510947 694 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AC011853.1-201ENST00000518911 454 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 NAP1L1P1-201ENST00000524793 1063 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC8.83□□□□□ -1
RC3H1Q5TC82 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC074029.1-201ENST00000552531 1044 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AL442663.2-201ENST00000554385 511 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC8.83□□□□□ -1
RC3H1Q5TC82 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AC027281.1-201ENST00000574178 758 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC005498.1-201ENST00000592125 465 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC009955.2-201ENST00000597288 542 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AC093388.1-201ENST00000609166 430 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC097505.1-201ENST00000610199 565 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC009159.1-201ENST00000618386 642 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 FRG1KP-201ENST00000623592 341 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AC073592.6-201ENST00000624271 415 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.83□□□□□ -1
RC3H1Q5TC82 AC024614.3-201ENST00000637860 256 ntBASIC8.83□□□□□ -1
RC3H1Q5TC82 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.83□□□□□ -1
RC3H1Q5TC82 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RC3H1Q5TC82 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms